Replication Data for: Phenotype is sustained during hospital readmissions following treatment for complicated severe malnutrition among Kenyan children: A retrospective cohort study

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Ngari, Moses M.; Gonzales, Gerard Bryan; Berkley, James A., 2020, "Replication Data for: Phenotype is sustained during hospital readmissions following treatment for complicated severe malnutrition among Kenyan children: A retrospective cohort study", https://doi.org/10.7910/DVN/IW8GLF, Harvard Dataverse, V1, UNF:6:uzZNU4VVuVhMSa4ZUzSgAQ== [fileUNF]

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Description	This is a replication dataset for the research publication: Gonzales, G.B., Ngari, M.M., Njunge, J.M., Thitiri, J., Mwalekwa, L., Mturi, N., Mwangome, M.K., Ogwang, C., Nyaguara, A. and Berkley, J.A., 2020. Phenotype is sustained during hospital readmissions following treatment for complicated severe malnutrition among Kenyan children: A retrospective cohort study. Maternal & child nutrition, 16(2), p.e12913. The objective of the study was to test the association between complicated severe acute malnutrition (cSAM) phenotype at index admission and readmission following recovery.
Subject	Medicine, Health and Life Sciences
Keyword	complicated SAM, kwashiorkor, malnutrition, marasmus, readmission, relapse, severe acute malnutrition
Related Publication	Gonzales, G.B., Ngari, M.M., Njunge, J.M., Thitiri, J., Mwalekwa, L., Mturi, N., Mwangome, M.K., Ogwang, C., Nyaguara, A. and Berkley, J.A., 2020. Phenotype is sustained during hospital readmissions following treatment for complicated severe malnutrition among Kenyan children: A retrospective cohort study. Maternal & child nutrition, 16(2), p.e12913.doi: 10.1111/mcn.12913
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	1 to 7 of 7 Files	Original Format Archival Format (.tab) Request Access
	Phenotype_sustainability_Readme.txt Plain Text - 9.1 KB Published Sep 17, 2020 0 Downloads MD5: d40f44670501997d48e87de33d1661a6 DocumentationReadme	Preview "Phenotype_sustainability_Readme.txt" Access File File Access Public Download Options Plain Text Download Metadata Data File Citation Download EndNote XML Download RIS Download BibTeX
	Phenotype_Sustaninability_Dataset_Codebook.pdf Adobe PDF - 137.4 KB Published Sep 17, 2020 1 Download MD5: 345958d7ac9977a223a80d93ef3308d0 DocumentationData Dictionary	Preview "Phenotype_Sustaninability_Dataset_Codebook.pdf" Access File File Access Public Download Options Adobe PDF Download Metadata Data File Citation Download EndNote XML Download RIS Download BibTeX
	competing_risk_multiple events.tab Tabular Data - 219.4 KB Published Sep 17, 2020 2 Downloads 22 Variables, 1850 Observations UNF:6:hOj0kI+oDc2EH5vb2ZzEBw== This file contains multiple records for hospital readmissions, clinical, demographic, dates, and time in the study from the Randomised controlled trial (SSC 1562) DataCSV	Access File File Access Restricted Request Access Download Metadata Data File Citation Download EndNote XML Download RIS Download BibTeX
	cSAM_readmission_dataset.tab Tabular Data - 239.4 KB Published Sep 17, 2020 2 Downloads 29 Variables, 1781 Observations UNF:6:loCSHvVzFj6u8FELvOxURw== This file contains multiple records for hospital readmissions, clinical, demographic, dates, and time in the study from the KCH Pediatric admissions linked to the KHDSS from 2002 to 2016 (SCC 2778) DataCSV	Access File File Access Restricted Request Access Download Metadata Data File Citation Download EndNote XML Download RIS Download BibTeX
	competing_risk.R R Syntax - 1.5 KB Published Sep 17, 2020 2 Downloads MD5: bdacd746632499e868b19d2768bce2af This analysis script uses the competing_risk_multiple events.csv dataset and computes the incidence of readmission and examines the association between SAM phenotype at index admission on the hospital using competing risk analysis model (using timereg package for R) CodeR	Preview "competing_risk.R" Access File File Access Public Download Options R Syntax Download Metadata Data File Citation Download EndNote XML Download RIS Download BibTeX
	R_code_SAMreadmission.R R Syntax - 3.9 KB Published Sep 17, 2020 2 Downloads MD5: dd195ccf33671b5c1871cf7d60c08094 This analysis script uses the cSAM_readmission_dataset.csv dataset to get summary of the KCH admissions, compute incidence of readmission and association between index readmission and readmission cSAM phenotypes CodeR	Preview "R_code_SAMreadmission.R" Access File File Access Public Download Options R Syntax Download Metadata Data File Citation Download EndNote XML Download RIS Download BibTeX
	R_relapse_updated.R R Syntax - 2.2 KB Published Sep 17, 2020 2 Downloads MD5: c0d6fd4465a789557b558c209ef895b6 This analysis script uses the cSAM_readmission_dataset.csv dataset to get the numbers of Kwash relapse during readmission reported in the Figure 1 (b) CodeR	Preview "R_relapse_updated.R" Access File File Access Public Download Options R Syntax Download Metadata Data File Citation Download EndNote XML Download RIS Download BibTeX

Citation Metadata

Persistent Identifier	doi:10.7910/DVN/IW8GLF
Publication Date	2020-09-17
Title	Replication Data for: Phenotype is sustained during hospital readmissions following treatment for complicated severe malnutrition among Kenyan children: A retrospective cohort study
Author	KEMRI-Wellcome Trust Research Programme, P.O Box 230, Kilifi, 80108, Kenya; The Childhood Acute Illness & Nutrition (CHAIN) Network, Nairobi, Kenyahttps://orcid.org/0000-0001-7149-5491 Laboratory of Gastroenterology, Department of Internal Medicine and Paediatrics, Faculty ofMedicine and Health Sciences, Ghenthttps://orcid.org/0000-0001-6614-3520 The Childhood Acute Illness & Nutrition (CHAIN) Network, Nairobi, Kenya; KEMRI-Wellcome Trust Research Programme, P.O Box 230, Kilifi, 80108, Kenya; Centre for Tropical Medicine & Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UKhttps://orcid.org/0000-0002-1236-849X
Point of Contact	Use email button above to contact. Ngari, Moses M. (KEMRI-Wellcome Trust Research Programme, P.O Box 230, Kilifi, 80108, Kenya)
Description	This is a replication dataset for the research publication: Gonzales, G.B., Ngari, M.M., Njunge, J.M., Thitiri, J., Mwalekwa, L., Mturi, N., Mwangome, M.K., Ogwang, C., Nyaguara, A. and Berkley, J.A., 2020. Phenotype is sustained during hospital readmissions following treatment for complicated severe malnutrition among Kenyan children: A retrospective cohort study. Maternal & child nutrition, 16(2), p.e12913. The objective of the study was to test the association between complicated severe acute malnutrition (cSAM) phenotype at index admission and readmission following recovery.
Subject	Medicine, Health and Life Sciences
Keyword	complicated SAM kwashiorkor malnutrition marasmus readmission relapse severe acute malnutrition
Related Publication	Gonzales, G.B., Ngari, M.M., Njunge, J.M., Thitiri, J., Mwalekwa, L., Mturi, N., Mwangome, M.K., Ogwang, C., Nyaguara, A. and Berkley, J.A., 2020. Phenotype is sustained during hospital readmissions following treatment for complicated severe malnutrition among Kenyan children: A retrospective cohort study. Maternal & child nutrition, 16(2), p.e12913. doi 10.1111/mcn.12913 https://doi.org/10.1111/mcn.12913
Depositor	Ngari, Moses M.
Deposit Date	2020-09-16

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