Replication Data for: Prospective Clinical Surveillance for Severe Acute Respiratory Illness in Kenyan Hospitals during the COVID-19 pandemic (doi:10.7910/DVN/1QXHPK)

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Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Part 5: Other Study-Related Materials
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Document Description

Citation

Title:

Replication Data for: Prospective Clinical Surveillance for Severe Acute Respiratory Illness in Kenyan Hospitals during the COVID-19 pandemic

Identification Number:

doi:10.7910/DVN/1QXHPK

Distributor:

Harvard Dataverse

Date of Distribution:

2024-10-25

Version:

1

Bibliographic Citation:

Lucinde, Ruth K.; Gathuri, Henry, 2024, "Replication Data for: Prospective Clinical Surveillance for Severe Acute Respiratory Illness in Kenyan Hospitals during the COVID-19 pandemic", https://doi.org/10.7910/DVN/1QXHPK, Harvard Dataverse, V1, UNF:6:KjXDJmYzsCnarQdkk4JHow== [fileUNF]

Study Description

Citation

Title:

Replication Data for: Prospective Clinical Surveillance for Severe Acute Respiratory Illness in Kenyan Hospitals during the COVID-19 pandemic

Identification Number:

doi:10.7910/DVN/1QXHPK

Authoring Entity:

Lucinde, Ruth K. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Gathuri, Henry (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Distributor:

Harvard Dataverse

Access Authority:

Lucinde, Ruth K.

Access Authority:

The Data Governance Committee

Depositor:

Lucinde, Ruth K.

Date of Deposit:

2024-10-25

Holdings Information:

https://doi.org/10.7910/DVN/1QXHPK

Study Scope

Keywords:

Medicine, Health and Life Sciences

Abstract:

<p>This is a replication dataset for the submitted manuscript titled: "<strong><i>Prospective Clinical Surveillance for Severe Acute Respiratory Illness in Kenyan Hospitals during the COVID-19 pandemic</i></strong>." <p>The data was generated by a prospective longitudinal hospital-based sentinel surveillance between May 2020 and December 2022 at 16 public hospitals in Kenya. The datasets contain demographic and clinical characteristics, COVID-19 infection and vaccination status, and outcome data collected from patients above 18 years admitted to adult medical wards in the participating hospitals.</p>

Kind of Data:

Restricted

Notes:

<p><strong>Data Access: </strong>Restricted</p> <p>Access to these data requires submission of a formal request for consideration by our Data Governance Committee. </p> <strong>How to request</strong> <ol> <li>Download and complete the <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx"><strong>data request form</strong></a></li> <li> Email completed data request form to the Data Governance Committee at <a href="mailto:dgc@kemri-wellcome.org?cc=lmwango@kemri-wellcome.org?Subject=Data%20Access%20Request"><strong>dgc@kemri-wellcome.org</strong></a> </li> </ol>

Methodology and Processing

Sources Statement

Data Access

Notes:

For access to data and more detailed information beyond the metadata and documentation provided, please send a signed data request form to [<a href="mailto:dgc@kemri-wellcome.org">dgc@kemri-wellcome.org</a> ]. <strong> <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx">Click to download Data Request Form</a></strong>

Other Study Description Materials

File Description--f10638743

File: MoHHospitalbasedSentinelSurvei_DataDictionary_2024-04-03_revised.tab

  • Number of cases: 138

  • No. of variables per record: 18

  • Type of File: text/tab-separated-values

Notes:

UNF:6:upmYyAZA03cqhfVP1/VZUA==

File Description--f10638744

File: SARI_dataset_final_May20_to_Dec22_V4_anon.tab

  • Number of cases: 56966

  • No. of variables per record: 195

  • Type of File: text/tab-separated-values

Notes:

UNF:6:o7cG3Ir948CBQxFKZz635A==

Variable Description

List of Variables:

Variables

Variable / Field Name

f10638743 Location:

Variable Format: character

Notes: UNF:6:n4MwkOjf4fUsl4hMixBSvQ==

Form Name

f10638743 Location:

Variable Format: character

Notes: UNF:6:St7GAEw82osP70PkwRFruw==

Section Header

f10638743 Location:

Variable Format: character

Notes: UNF:6:D5ctUIXfawicebOONUju3A==

Field Type

f10638743 Location:

Variable Format: character

Notes: UNF:6:IubZ8yZv6+7TO5s7rsUGFw==

Field Label

f10638743 Location:

Variable Format: character

Notes: UNF:6:RRkrhSjHO/yiK2piDPSDfA==

Choices, Calculations, OR Slider Labels

f10638743 Location:

Variable Format: character

Notes: UNF:6:czghdCkJ0xSpQcfBdfry+g==

Field Note

f10638743 Location:

Variable Format: character

Notes: UNF:6:s18WEOJOYYRRTKeRRG8waQ==

Text Validation Type OR Show Slider Number

f10638743 Location:

Variable Format: character

Notes: UNF:6:8HXFtfdMcQjYDtxNHmEIQw==

Text Validation Min

f10638743 Location:

Summary Statistics: Mean 18.25; Min. 1.0; Valid 18.0; Max. 150.0; StDev 35.126766231498635

Variable Format: numeric

Notes: UNF:6:xbWpJVlH7rQ/VP2KVOgkBg==

Text Validation Max

f10638743 Location:

Summary Statistics: Valid 18.0; StDev 120.58012008402183; Min. 5.0; Max. 450.0; Mean 110.77777777777777

Variable Format: numeric

Notes: UNF:6:FYq+3bq9KTenxOB6dKxD4w==

Identifier?

f10638743 Location:

Summary Statistics: StDev NaN; Min. NaN; Valid 0.0; Mean NaN; Max. NaN

Variable Format: numeric

Notes: UNF:6:53u4c3S9Ops8zfky0mAJGg==

Branching Logic (Show field only if...)

f10638743 Location:

Variable Format: character

Notes: UNF:6:MkFbAZghcDAN3qDDN9oTIQ==

Required Field?

f10638743 Location:

Variable Format: character

Notes: UNF:6:d1Wsys65arsvILoedDIlQA==

Custom Alignment

f10638743 Location:

Variable Format: character

Notes: UNF:6:sOsoG72S5IVk8jCN3kiPng==

Question Number (surveys only)

f10638743 Location:

Summary Statistics: Mean NaN; Max. NaN; Min. NaN; StDev NaN; Valid 0.0

Variable Format: numeric

Notes: UNF:6:53u4c3S9Ops8zfky0mAJGg==

Matrix Group Name

f10638743 Location:

Summary Statistics: Mean NaN; Min. NaN; Max. NaN; Valid 0.0; StDev NaN

Variable Format: numeric

Notes: UNF:6:53u4c3S9Ops8zfky0mAJGg==

Matrix Ranking?

f10638743 Location:

Summary Statistics: Max. NaN; Valid 0.0; StDev NaN; Mean NaN; Min. NaN;

Variable Format: numeric

Notes: UNF:6:53u4c3S9Ops8zfky0mAJGg==

Field Annotation

f10638743 Location:

Variable Format: character

Notes: UNF:6:SePN9GOdhgbe+RylhMfp3w==

Other Study-Related Materials

Label:

MoH Hospital-based Sentinel Surveillance_Redcap_CRF.pdf

Notes:

application/pdf