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Part 1: Document Description
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Citation |
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Title: |
Replication Data for: Genomic epidemiology of SARS-CoV-2 in Sudan: A retrospective analysis 2020-2022 |
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Identification Number: |
doi:10.7910/DVN/782VRG |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2023-11-22 |
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Version: |
1 |
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Bibliographic Citation: |
Mburu, Maureen w.; Katama, Esther N.; Lambisia, Arnold W., 2023, "Replication Data for: Genomic epidemiology of SARS-CoV-2 in Sudan: A retrospective analysis 2020-2022", https://doi.org/10.7910/DVN/782VRG, Harvard Dataverse, V1, UNF:6:4dXn6/Gg1O+yPYg0IxCH7Q== [fileUNF] |
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Citation |
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Title: |
Replication Data for: Genomic epidemiology of SARS-CoV-2 in Sudan: A retrospective analysis 2020-2022 |
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Identification Number: |
doi:10.7910/DVN/782VRG |
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Authoring Entity: |
Mburu, Maureen w. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Katama, Esther N. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Lambisia, Arnold W. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Grant Number: |
220985 |
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Grant Number: |
17/63/82 |
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Grant Number: |
16/136/33 |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
Githinji, George |
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Access Authority: |
The Data Governance Committee |
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Depositor: |
Mburu, Maureen W. |
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Date of Deposit: |
2023-11-22 |
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Holdings Information: |
https://doi.org/10.7910/DVN/782VRG |
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Study Scope |
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Keywords: |
Medicine, Health and Life Sciences |
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Abstract: |
<p>This is a replication dataset for the manuscript titled:" <a href="">Genomic epidemiology of SARS-CoV-2 in Sudan: A retrospective analysis 2020-2022</a>."</p> <p>The dataset presented is part of a study that investigated the genomic epidemiology of SARS-CoV-2 in Sudan. This dataset contains results of samples positive for SARS-COV-2 by real-time PCR for the period 2020-2022 in Sudan. Aside from the samples tested it also contains the patients’ sociodemographic characteristic, pango lineage clade assignment and VOC assignment. The dataset is used to generate new SARS-CoV-2 genome sequences from RT-PCR positive samples collected in Sudan. </p> |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Other Study Description Materials |
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File Description--f7593188 |
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File: DATA1_anon.tab |
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Notes: |
UNF:6:4dXn6/Gg1O+yPYg0IxCH7Q== |
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List of Variables: |
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Variables |
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f7593188 Location: |
Summary Statistics: Min. 1.0; Valid 667.0; StDev 192.69059828301604; Mean 334.0; Max. 667.0; Variable Format: numeric Notes: UNF:6:ZD9UOmZoLxj8rEErs1tAmg== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:y82S+gq7D7s1SfaOVLBXMg== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:Gna/MXDEk3c3UzlZaBVeZg== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:B3LTDEJqJriejFKpX4IgkQ== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:sYjlyJH0A6H3jz2x/nKc4Q== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:H/gUmDb5osxCnW7oV29wqQ== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:8XKP4V2jSV0r8O3UjbyOtw== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:2xoOEPJ68ifxe0LwRrnOQA== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:6Q1pDnLnv1avf1y54H78RQ== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:1uxxYkDrj/3LHR7IIctCwQ== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:+rJTPRm5wZm6xhNqqLSaxw== |
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f7593188 Location: |
Variable Format: character Notes: UNF:6:zVU8i4ONRnQEuiRtro3CJA== |
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Label: |
DATA1_anon.xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
MWMburu_Sudan_SARS_Data_Codebook.pdf |
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Notes: |
application/pdf |
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Label: |
MWMburu_Sudan_SARS_Readme.txt |
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Notes: |
text/plain |
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Label: |
Tables_Rmarkdown.Rmd |
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Notes: |
text/x-r-notebook |