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Part 1: Document Description
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Citation |
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Title: |
Replication Data for: Characterizing Plasmodium falciparum genetic diversity and complexity of infections in clinical malaria infections in Western and Coastal Kenya using the poly-alpha microsatellite marker |
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Identification Number: |
doi:10.7910/DVN/DAHYSD |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2025-03-17 |
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Version: |
2 |
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Bibliographic Citation: |
Achieng, Nicole; Kimenyi, K. Muteru; Mgawe, Cavin; Ndwiga, Leonard; Ochola-Oyier, Lynette Isabella, 2025, "Replication Data for: Characterizing Plasmodium falciparum genetic diversity and complexity of infections in clinical malaria infections in Western and Coastal Kenya using the poly-alpha microsatellite marker", https://doi.org/10.7910/DVN/DAHYSD, Harvard Dataverse, V2, UNF:6:1X4CWOSdFdKC1T6kemZecQ== [fileUNF] |
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Citation |
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Title: |
Replication Data for: Characterizing Plasmodium falciparum genetic diversity and complexity of infections in clinical malaria infections in Western and Coastal Kenya using the poly-alpha microsatellite marker |
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Identification Number: |
doi:10.7910/DVN/DAHYSD |
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Authoring Entity: |
Achieng, Nicole (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Kimenyi, K. Muteru (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Mgawe, Cavin (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Ndwiga, Leonard (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Ochola-Oyier, Lynette Isabella (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
Achieng, Nicole |
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Access Authority: |
Kimenyi, K. Muteru |
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Access Authority: |
The Data Governance Committee |
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Depositor: |
Achieng, Nicole |
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Date of Deposit: |
2025-03-17 |
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Holdings Information: |
https://doi.org/10.7910/DVN/DAHYSD |
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Study Scope |
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Keywords: |
Medicine, Health and Life Sciences, Genotyping, poly-alpha |
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Abstract: |
<p>This is a replication dataset for the manuscript titled: “<i><strong>Characterizing Plasmodium falciparum genetic diversity and complexity of infections in clinical malaria infections in Western and Coastal Kenya using the poly-alpha microsatellite marker</strong></i>.”</p> <p>Poly-alpha microsatellite marker was genotyped from the isolates by PCR, fragment sizes determined by capillary electrophoresis and fragment data analyzed, per sample, using the GeneMarker software. The data shared comprises of fragment sizes from both the major and minor genotypes, per isolate, that were used to determine polyclonality. Only the major genotype was used to determine the expected heterozygosity (He). The parasitemia and age information for each isolate, where applicable, are also provided.</p> |
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Kind of Data: |
Open Access |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Notes: |
The files will be publicly available once the manuscript is published. |
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Other Study Description Materials |
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File Description--f10989488 |
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File: COI_combined_data.tab |
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Notes: |
UNF:6:cIvhZZ0tpAGcP66tErs/gQ== |
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This file contains information about the COI per study participants in the two study locations |
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File Description--f10989486 |
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File: Combined_genotypes.tab |
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Notes: |
UNF:6:2x3xglQ7rX9EVvnFgcotRQ== |
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This file contains information about the genotypes and their frequencies per study location |
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File Description--f10989489 |
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File: Combined_major_genotypes.tab |
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Notes: |
UNF:6:cZtXAGgpzK6x61sI5NhIPg== |
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This file contains information about the major genotypes per sample per study location that was used for genetic analyses |
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File Description--f10989487 |
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File: Combined_metadata.tab |
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Notes: |
UNF:6:DQ3ivo63Lif4l2PfU1M9Lw== |
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This file contains age, parasitemia and gender information for the samples from the both study locations. |
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Label: |
Achieng_et_al_Data Dictionary.pdf |
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Notes: |
application/pdf |
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Label: |
Readme_Achieng_et_al.txt |
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Notes: |
text/plain |