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Part 1: Document Description
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Citation |
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Title: |
Replication Data for: Human Rhinovirus Spatial-Temporal Epidemiology in Rural Coastal Kenya, 2015-2016, Observed Through Outpatient Surveillance |
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Identification Number: |
doi:10.7910/DVN/DUQNDX |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2018-09-21 |
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Version: |
1 |
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Bibliographic Citation: |
Morobe, John M.; Nyiro, Joyce U.; Brand, Samuel; Kamau, Everlyn M.; Munywoki, Patrick K.; Agoti, Charles N.; Nokes, David James, 2018, "Replication Data for: Human Rhinovirus Spatial-Temporal Epidemiology in Rural Coastal Kenya, 2015-2016, Observed Through Outpatient Surveillance", https://doi.org/10.7910/DVN/DUQNDX, Harvard Dataverse, V1, UNF:6:5JRqwfP6OTLFNCN4OdODXg== [fileUNF] |
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Citation |
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Title: |
Replication Data for: Human Rhinovirus Spatial-Temporal Epidemiology in Rural Coastal Kenya, 2015-2016, Observed Through Outpatient Surveillance |
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Identification Number: |
doi:10.7910/DVN/DUQNDX |
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Authoring Entity: |
Morobe, John M. (Institute of Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology, Juja, Kenya; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Nyiro, Joyce U. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Brand, Samuel (4. School of Life Sciences, University of Warwick, Coventry, UK) |
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Kamau, Everlyn M. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Munywoki, Patrick K. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Agoti, Charles N. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Nokes, David James (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Other identifications and acknowledgements: |
Mwango, Lillian |
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Other identifications and acknowledgements: |
Otieno, Grieven |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
John Mwita Morobe |
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Depositor: |
John M. Morobe |
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Date of Deposit: |
2018-09-17 |
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Holdings Information: |
https://doi.org/10.7910/DVN/DUQNDX |
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Study Scope |
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Keywords: |
Medicine, Health and Life Sciences |
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Abstract: |
<p>Data used in this analysis was created from a database generated through surveillance to characterize the transmission pathways of viral respiratory infections in Kilifi County. Data was collected from patients presenting in 9 out-patient health facilities within the KHDSS area with symptoms of respiratory infection. The study was conducted from December 2015 to June 2017. However, this dataset includes surveillance conducted from December 2015 to November 2016 and utilized samples that tested positive for human rhinovirus.</p> |
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Notes: |
<p><strong>Data Availability Statement</strong></p> <p>Access to the dataset(s) is restricted as they contain personally identifiable information. Accompanying documentation is available under open access. For more detailed information beyond the metadata and documentation provided, there is a process of managed access requiring submission of a request form for consideration by our Data Governance Committee ( <a href="http://kemri-wellcome.org/about-us/#ChildVerticalTab_15">http://kemri-wellcome.org/about-us/#ChildVerticalTab_15</a> ). Please contact the Data Governance Committee via this email address- dgc@kemri-wellcome.org</p> |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Notes: |
This data is made available under the Creative Commons Attribution 4.0 International (CC BY 4.0) - https://creativecommons.org/licenses/by/4.0/legalcode. Publications based on these data should acknowledge this source by means of bibliographic citations. For more information on these data, please contact the author via John Mwita Morobe [jmwita32@gmail.com.], Joyce Nyiro [JNyiro@kemri-wellcome.org] or the data governance office via this email address: dgc@kemri-wellcome.org |
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Access to the dataset(s) is restricted as they contain personally identifiable information. Accompanying documentation is available under open access. For more detailed information beyond the metadata and documentation provided, there is a process of managed access requiring submission of a request form for consideration by our Data Governance Committee ( <a href="http://kemri-wellcome.org/about-us/#ChildVerticalTab_15">http://kemri-wellcome.org/about-us/#ChildVerticalTab_15</a> ). Please contact the Data Governance Committee via this email address- dgc@kemri-wellcome.org |
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Other Study Description Materials |
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File Description--f3224865 |
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File: Kilifi_HRV strains data.tab |
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Notes: |
UNF:6:cUduTlLrKP0gzRIoQlMH7w== |
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File Description--f3224864 |
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File: NPS samples collected and tested for HRV.tab |
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Notes: |
UNF:6:A/lvUeVnijyD2tMVGoZelA== |
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Label: |
1_des_analysis.do |
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Text: |
Script for generating Descriptive Statistics |
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Notes: |
application/x-stata-syntax |
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Label: |
Accessions numbers.xls |
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Notes: |
application/vnd.ms-excel |
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Label: |
HRV analysis for paper.ows |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
HRV-A Sequences.fas |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
HRV-B Sequences.fas |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
HRV-C Sequences.fas |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
HRV_data_codebook.pdf |
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Text: |
Codebook |
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Notes: |
application/pdf |
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Label: |
HRV_data_Readme.txt |
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Text: |
Readme File |
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Notes: |
text/plain |
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Label: |
MScriptForHRVTests.m |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
Workflow_image.tiff |
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Notes: |
image/tiff |