Replication Data for: Detection of pathogens associated with early-onset neonatal sepsis in cord blood at birth using quantitative PCR (doi:10.7910/DVN/FXKGRB)

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Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Part 5: Other Study-Related Materials
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Document Description

Citation

Title:

Replication Data for: Detection of pathogens associated with early-onset neonatal sepsis in cord blood at birth using quantitative PCR

Identification Number:

doi:10.7910/DVN/FXKGRB

Distributor:

Harvard Dataverse

Date of Distribution:

2021-11-30

Version:

Bibliographic Citation:

Obiero, Christina W.; Gumbi, Wilson; Mwakio, Stella; Mwangudzah, Hope; Seale, Anna C.; Taniuchi, Mami; Liu, Jie; Houpt,Eric; Berkley, James A., 2021, "Replication Data for: Detection of pathogens associated with early-onset neonatal sepsis in cord blood at birth using quantitative PCR", https://doi.org/10.7910/DVN/FXKGRB, Harvard Dataverse, V2, UNF:6:1y774FFEonin35nFyxDD2A== [fileUNF]

Study Description

Citation

Title:

Replication Data for: Detection of pathogens associated with early-onset neonatal sepsis in cord blood at birth using quantitative PCR

Identification Number:

doi:10.7910/DVN/FXKGRB

Authoring Entity:

Obiero, Christina W. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; University of Amsterdam AMC, Amsterdam, Netherlands)

Gumbi, Wilson (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Mwakio, Stella (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Mwangudzah, Hope (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Seale, Anna C. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; London School of Hygiene & Tropical Medicine, London, UK; Haramaya University, Harar, Ethiopia)

Taniuchi, Mami (University of Virginia, Virginia, USA)

Liu, Jie (University of Virginia, Virginia, USA)

Houpt,Eric (University of Virginia, Virginia, USA)

Berkley, James A. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; University of Oxford, Oxford, UK; The Childhood Acute Illness & Nutrition (CHAIN) Network, Nairobi, Kenya)

Distributor:

Harvard Dataverse

Access Authority:

Mwango, Lillian

Depositor:

Obiero, Christina W.

Date of Deposit:

2021-11-30

Holdings Information:

https://doi.org/10.7910/DVN/FXKGRB

Study Scope

Keywords:

Medicine, Health and Life Sciences, Medicine, Health and Life Sciences, Neonate, sepsis, molecular, aetiology, PCR

Abstract:

This is a replication dataset for the manuscript titled:"<a href="">Detection of pathogens associated with early-onset neonatal sepsis in cord blood at birth using quantitative PCR</a>" submitted to Welcome Open Research journal. There is paucity of data on the aetiology of early onset sepsis despite its associated significant mortality and neurological impairment. Diagnostic challenges include limited laboratory capacity, non-culturable and viral pathogens and that mortality may occur very soon after birth.Using TaqMan Array cards for multiplex PCR, we compared 603 cases hospitalised within the first 48 hours of birth with clinical features of possible Serious Bacterial Infection (pSBI) (including 101 deaths), to 300 healthy controls who had cord blood samples collected in identical circumstances but remained well.Maternal and neonatal data at birth, incouding cord blood samples, were obtained within a systematic clinical surveillance of maternal and neonatal adverse events (clinicaltrials.gov NCT01757028).Neonatal admission data of 603 cases with pSBI was obtained when neonates were hospitalised at the Kilifi County Hospital as part of an ongoing ward surveillance for bacteraemia.

Notes:

Data Access: Open License: <a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a>

Methodology and Processing

Sources Statement

Data Access

Citation Requirement:

Publications based on this data collection should acknowledge this source by means of bibliographic citation.

Notes:

This data is licensed under the <a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a>

Open Access

Other Study Description Materials

File Description--f5588830

File: Maternal variables-1.tab

Number of cases: 903
No. of variables per record: 19
Type of File: text/tab-separated-values

Notes:

UNF:6:2ypdRfYj93VII1OhfLIZGA==

File Description--f5588832

File: Maternal variables.tab

Number of cases: 903
No. of variables per record: 19
Type of File: text/tab-separated-values

Notes:

UNF:6:phcQWsypQY2P84a7WseStQ==

File Description--f5588833

File: Neonatal variables-1.tab

Number of cases: 903
No. of variables per record: 35
Type of File: text/tab-separated-values

Notes:

UNF:6:GO0YgR6xzqPf1ynAWaxSpw==

File Description--f5588829

File: Neonatal variables.tab

Number of cases: 903
No. of variables per record: 35
Type of File: text/tab-separated-values

Notes:

UNF:6:n4qI/waCwEHltZGeDb5Alw==

File Description--f5588974

File: PCR Ct values-1.tab

Number of cases: 903
No. of variables per record: 89
Type of File: text/tab-separated-values

Notes:

UNF:6:LbGMfmWfYk3uXm2JBq+vkw==

File Description--f5588973

File: PCR Ct values.tab

Number of cases: 903
No. of variables per record: 89
Type of File: text/tab-separated-values

Notes:

UNF:6:EgdiBy0YUyRP+ZGbTK1sTg==

Variable Description

List of Variables:

age_yrs_mom - maternal age
mraptured - Membr raptured at admission
psbi - psbi
m_status - marital status
edu_level - education level
emerg - Emergency signs
drain - drainage of liqour
bleed - PV bleeding
mvmt - Decreased foetal movements
n_oedema - oedema
n_dysuria - dysuria
n_fever - history of fever
n_first - First pregnancy
n_antibio4 - Antibiotics last 4 weeks
n_temp - temperature
n_weight - weight
n_height - height
n_muac - mid-upper arm circ
temp_cat - Temp categories
age_yrs_mom - age_yrs_mom
mraptured - mraptured
psbi - psbi
m_status - m_status
edu_level - edu_level
emerg - emerg
drain - drain
bleed - bleed
mvmt - mvmt
n_oedema - n_oedema
n_dysuria - n_dysuria
n_fever - n_fever
n_first - n_first
n_antibio4 - n_antibio4
n_temp - n_temp
n_weight - n_weight
n_height - n_height
n_muac - n_muac
temp_cat - temp_cat
apgar1 - score at 1min
apgar5 - score at 5min
apgar10 - score at 10min
year - year
age_admin - admission age
temp_axilla - temperature
resp_rate - respiratory rate
n_adm - Ever admitted
nsex - Sex coded as 0 Male, 1 Female
resuscit - Resuscitation
nfever - history of fever
nbreathing_diff - difficulty in breathing
nconvulsion - convulsions
nresp_rate - Respiratory rate categories
ncyanosis - cyanosis
nflaring - nasal flaring
nindrawing - chest indrawing
n_conscious - Level of consciousness
nweight - Birth weight kg
nlength - length
nmuac - muac
nhead_circ - head circumference
bld_genus - Blood culture genus
bld_species - Blood culture species
prom - PROM >18hr
m_deliv - Mode of delivery
feed_diff - Difficulty feeding
mvmt - Movement only when stimulated
temp_psbi - Temp pSBI category
apg5 - 5 minute apgar score
uti - Urinalysis suggesting UTI
gbd - gestation
age_d - age at admission
psbi_1 - psbi
psbi_2 - psbi with outcome
apgar1 - apgar1
apgar5 - apgar5
apgar10 - apgar10
year - year
age_admin - age_admin
temp_axilla - temp_axilla
resp_rate - resp_rate
n_adm - n_adm
nsex - nsex
resuscit - resuscit
nfever - nfever
nbreathing_diff - nbreathing_diff
nconvulsion - nconvulsion
nresp_rate - nresp_rate
ncyanosis - ncyanosis
nflaring - nflaring
nindrawing - nindrawing
n_conscious - n_conscious
nweight - nweight
nlength - nlength
nmuac - nmuac
nhead_circ - nhead_circ
bld_genus - bld_genus
bld_species - bld_species
prom - prom
m_deliv - m_deliv
feed_diff - feed_diff
mvmt - mvmt
temp_psbi - temp_psbi
apg5 - apg5
uti - uti
gbd - gbd
age_d - age_d
psbi_1 - psbi_1
psbi_2 - psbi_2
a_baum1 - A. baumanii ct1
a_baum2 - A. baumanii ct2
bact_16s - Bacterial 16S
ctx_m - ctx-M
cmv_1 - CMV ct1
cmv_2 - CMV ct2
ecoli_shig_1 - E. coli/Shig ct1
ecoli_shig_2 - E. coli/Shig ct2
e_faec1 - E. faecalis ct1
e_faec2 - E. faecalis ct2
enterov_1 - Enterovirus ct1
enterov_2 - Enterovirus ct2
h_influ1 - H. influenzae ct1
h_influ2 - H. influenzae ct2
hs9_s1 - Hs99999901_s1
hsv1_1 - hsv_1 ct1
hsv1_2 - hsv_1 ct2
hsv2_1 - hsv_2 ct1
hsv2_2 - hsv_2 ct2
k_oxy1 - k. oxytoca ct1
k_oxy2 - k. oxytoca ct2
k_pneumo1 - k. pneumoniae ct1
k_pneumo2 - k. pneumoniae ct2
l_mono1 - l. monocytogenes ct1
l_mono2 - l. monocytogenes ct2
m_tb1 - m. tuberculosis ct1
m_tb2 - m. tuberculosis ct2
ms2_1 - ms2_ct1
ms2_2 - ms2_ct1
n_meng1 - n. meningitidis ct1
n_meng2 - n. meningitidis ct2
p_aerug1 - p. aeruginosa ct1
p_aerug2 - p. aeruginosa ct2
phhv_1 - phHV ct1
phhv_2 - phHV ct2
plasmod - plasmodium ct
s_agalact1 - s. agalactiae ct1
s_agalact2 - s. agalactiae ct2
s_aureus1 - s. aureus ct1
s_aureus2 - s. aureus ct2
s_pneumo1 - s. pneumoniae ct1
s_pneumo2 - s. pneumoniae ct2
s_pyog1 - s. pyogenes ct1
s_pyog2 - s. pyogenes ct2
salm_1 - salmonella ct1
salm_2 - salmonella ct2
card - card
ab_40 - A. baumani
cmv_40 - CMV
eshi_40 - E. coli/Shigella
efaec_40 - E. faecalis
entero_40 - Enterovirus
hinflu_40 - H. influenzae
hsv1_40 - HSV 1
hsv2_40 - HSV 2
koxy_40 - K. oxytoca
kpneumo_40 - K. pneumoniae
lmono_40 - L. monocytogenes
mtb_40 - M. tuberculosis
nmeng_40 - N. meningitidis
paeru_40 - P. aeruginosa
plasm_40 - Plasmodium
saga_40 - S. agalactiae
saur_40 - S. aureus
spne_40 - S. pneumoniae
spyo_40 - S. pyogenes
salm_40 - Salmonella
psbi_1 - pSBI no/yes
psbi_2 - pSBI no/yes alive/yes died
bldcul - admission bld culture
weight
x
grp1 - Pattern 1
grp2 - Pattern 2
grp3 - Pattern 3
urea_1 - Ureaplasma ct1
urea_2 - Ureaplasma ct2
urea_3 - Uniplex PCR Ct
final_urea40 - Final Ureaplasma after repeats
taq - Taq results
bac_1 - All bacteria
bac_2 - All bacteria except contaminants
vir - All viruses
any - Any target
good - Any target except contam
mult - Multiple pos
grp4 - Pattern 4
case_comp - Cases survived vs died
bc - admission bld culture 2
a_baum1 - a_baum1
a_baum2 - a_baum2
bact_16s - bact_16s
ctx_m - ctx_m
cmv_1 - cmv_1
cmv_2 - cmv_2
ecoli_shig_1 - ecoli_shig_1
ecoli_shig_2 - ecoli_shig_2
e_faec1 - e_faec1
e_faec2 - e_faec2
enterov_1 - enterov_1
enterov_2 - enterov_2
h_influ1 - h_influ1
h_influ2 - h_influ2
hs9_s1 - hs9_s1
hsv1_1 - hsv1_1
hsv1_2 - hsv1_2
hsv2_1 - hsv2_1
hsv2_2 - hsv2_2
k_oxy1 - k_oxy1
k_oxy2 - k_oxy2
k_pneumo1 - k_pneumo1
k_pneumo2 - k_pneumo2
l_mono1 - l_mono1
l_mono2 - l_mono2
m_tb1 - m_tb1
m_tb2 - m_tb2
ms2_1 - ms2_1
ms2_2 - ms2_2
n_meng1 - n_meng1
n_meng2 - n_meng2
p_aerug1 - p_aerug1
p_aerug2 - p_aerug2
phhv_1 - phhv_1
phhv_2 - phhv_2
plasmod - plasmod
s_agalact1 - s_agalact1
s_agalact2 - s_agalact2
s_aureus1 - s_aureus1
s_aureus2 - s_aureus2
s_pneumo1 - s_pneumo1
s_pneumo2 - s_pneumo2
s_pyog1 - s_pyog1
s_pyog2 - s_pyog2
salm_1 - salm_1
salm_2 - salm_2
card - card
ab_40 - ab_40
cmv_40 - cmv_40
eshi_40 - eshi_40
efaec_40 - efaec_40
entero_40 - entero_40
hinflu_40 - hinflu_40
hsv1_40 - hsv1_40
hsv2_40 - hsv2_40
koxy_40 - koxy_40
kpneumo_40 - kpneumo_40
lmono_40 - lmono_40
mtb_40 - mtb_40
nmeng_40 - nmeng_40
paeru_40 - paeru_40
plasm_40 - plasm_40
saga_40 - saga_40
saur_40 - saur_40
spne_40 - spne_40
spyo_40 - spyo_40
salm_40 - salm_40
psbi_1 - psbi_1
psbi_2 - psbi_2
bldcul - bldcul
weight - weight
x - x
grp1 - grp1
grp2 - grp2
grp3 - grp3
urea_1 - urea_1
urea_2 - urea_2
urea_3 - urea_3
final_urea40 - final_urea40
taq - taq
bac_1 - bac_1
bac_2 - bac_2
vir - vir
any - any
good - good
mult - mult
grp4 - grp4
case_comp - case_comp
bc - bc

Variables

maternal age

f5588830 Location:

Summary Statistics: StDev 7.3749293274434224; Max. 52.104; Mean 27.11153786516854; Valid 890.0; Min. 11.5127

Variable Format: numeric

Notes: UNF:6:HoWCB8yaPvxEhJBAI8dHZA==

Membr raptured at admission

f5588830 Location:

Value	Label	Frequency
0.	no	611
1.	yes	249
2.	missing	43

Summary Statistics: StDev 0.573548319637332; Min. 0.0; Max. 2.0; Mean 0.37098560354374255; Valid 903.0

Variable Format: numeric

Notes: UNF:6:kXTsmsV8A10T3/OcKGQH1w==

psbi

f5588830 Location:

Value	Label	Frequency	Text
0.	no psbi	300
1.	psbi	603

Summary Statistics: Valid 903.0; StDev 0.47127254474896213; Max. 1.0; Mean 0.66777408637874; Min. 0.0

Variable Format: numeric

Notes: UNF:6:6Fp5AwYnraVeZSHh+X/+ng==

marital status

f5588830 Location:

Value	Label	Frequency
0.	married	807
4.	missing	26
1.	single	62
3.	widowed	4
2.	divorced	4

Summary Statistics: Max. 4.0; Min. 0.0; Mean 0.2059800664451829; Valid 903.0; StDev 0.7383145151812084

Variable Format: numeric

Notes: UNF:6:FUu33Y/yprC8k3+ccINhNw==

education level

f5588830 Location:

Value	Label	Frequency
2.	secondary	122
3.	higher	46
0.	none	163
1.	primary	538
4.	missing	34

Summary Statistics: Valid 903.0; Min. 0.0; StDev 0.91129668827325; Max. 4.0; Mean 1.1694352159468435

Variable Format: numeric

Notes: UNF:6:cBSpopimh34zZMjKVZSoyg==

Emergency signs

f5588830 Location:

Value	Label	Frequency
2.	missing	7
1.	yes	125
0.	no	771

Summary Statistics: StDev 0.3819711156570833; Max. 2.0; Mean 0.15393133997785138; Valid 903.0; Min. 0.0

Variable Format: numeric

Notes: UNF:6:ejhmLwHUn+rgv7ZKeO8c/A==

drainage of liqour

f5588830 Location:

Value	Label	Frequency
2.	missing	9
0.	no	755
1.	yes	139

Summary Statistics: StDev 0.40466132607612904; Min. 0.0; Mean 0.17386489479512773; Max. 2.0; Valid 903.0

Variable Format: numeric

Notes: UNF:6:+y5Kl9XhbFoLVxDJcvYSOQ==

PV bleeding

f5588830 Location:

Value	Label	Frequency
0.	no	826
2.	missing	9
1.	yes	68

Summary Statistics: StDev 0.32591254082616034; Valid 903.0; Min. 0.0; Max. 2.0; Mean 0.0952380952380954

Variable Format: numeric

Notes: UNF:6:s0XNWLBdIm1Hg04WRCZYLQ==

Decreased foetal movements

f5588830 Location:

Value	Label	Frequency
2.	missing	10
0.	no	869
1.	yes	24

Summary Statistics: StDev 0.2618712201859399; Mean 0.04872646733111854; Min. 0.0; Max. 2.0; Valid 903.0

Variable Format: numeric

Notes: UNF:6:HSU8zKD+5+OLNfndTpU2Pw==

oedema

f5588830 Location:

Value	Label	Frequency
1.	yes	55
0.	no	838
2.	missing	10

Summary Statistics: Max. 2.0; StDev 0.31371241812460554; Valid 903.0; Mean 0.08305647840531562; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:BXTXGvCTKOCKyF5UTGsX4w==

dysuria

f5588830 Location:

Value	Label	Frequency
1.	yes	29
2.	missing	10
0.	no	864

Summary Statistics: Mean 0.0542635658914728; Min. 0.0; Valid 903.0; Max. 2.0; StDev 0.27119895837490504;

Variable Format: numeric

Notes: UNF:6:VP/8bmZ7hYo39DShqHlJWQ==

history of fever

f5588830 Location:

Value	Label	Frequency
0.	no	878
1.	yes	11
2.	missing	14

Summary Statistics: Min. 0.0; Mean 0.04318936877076416; Valid 903.0; StDev 0.2690947595153136; Max. 2.0

Variable Format: numeric

Notes: UNF:6:FcRtttk0Uh+5pwrgXhlYrg==

First pregnancy

f5588830 Location:

Value	Label	Frequency
2.	missing	63
0.	no	590
1.	yes	250

Summary Statistics: Valid 903.0; Max. 2.0; StDev 0.6188443478081109; Mean 0.4163898117386489; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:kEckokTd49/cRrz4Spztug==

Antibiotics last 4 weeks

f5588830 Location:

Value	Label	Frequency
2.	missing	3
0.	no	813
1.	yes	87

Summary Statistics: StDev 0.3148609077880283; Max. 2.0; Valid 903.0; Min. 0.0; Mean 0.10299003322259144

Variable Format: numeric

Notes: UNF:6:VwIKGA3RqFoWPZX6QD9mmw==

temperature

f5588830 Location:

Summary Statistics: Mean 36.487329234247625; Max. 39.5; Min. 31.100000381469727; StDev 0.6123224395401786; Valid 805.0;

Variable Format: numeric

Notes: UNF:6:DXPX4E2R8muv7bFUIn/c4A==

weight

f5588830 Location:

Summary Statistics: Valid 755.0; Max. 173.0; StDev 13.835026669029958; Min. 37.79999923706055; Mean 62.4119337978742;

Variable Format: numeric

Notes: UNF:6:QiUK/1eIWFe6lc0YKbjkiA==

height

f5588830 Location:

Summary Statistics: Max. 188.0; Valid 569.0; StDev 11.585374314369528; Min. 60.5; Mean 154.72340942811883;

Variable Format: numeric

Notes: UNF:6:m4FfSXMaj0VhwcL6Sxhz8A==

mid-upper arm circ

f5588830 Location:

Summary Statistics: Mean 25.996083264251673; Valid 817.0; StDev 3.439274950507203; Min. 10.600000381469727; Max. 43.5;

Variable Format: numeric

Notes: UNF:6:vPAZ1Ra7utvcvQMypnF4ng==

Temp categories

f5588830 Location:

Value	Label	Frequency
0.	36-38	735
3.	missing	97
2.	<36	64
1.	>38	7

Summary Statistics: Valid 903.0; Min. 0.0; Mean 0.4717607973421929; StDev 1.0181446433492363; Max. 3.0

Variable Format: numeric

Notes: UNF:6:hATHdx9zo5zUwNy5efG1AA==

age_yrs_mom

f5588832 Location:

Summary Statistics: Min. 11.5127; Max. 52.104; StDev 7.3749293274434224; Mean 27.11153786516854; Valid 890.0

Variable Format: numeric

Notes: UNF:6:HoWCB8yaPvxEhJBAI8dHZA==

mraptured

f5588832 Location:

Variable Format: character

Notes: UNF:6:VO8jwzKfxJ2A5whCeyaeNg==

psbi

f5588832 Location:

Variable Format: character

Notes: UNF:6:odf8JDVB5HyJzwGT2xmESA==

m_status

f5588832 Location:

Variable Format: character

Notes: UNF:6:WhBE0uKVbCGkitie9HQYeQ==

edu_level

f5588832 Location:

Variable Format: character

Notes: UNF:6:9km5KU6RMKweZ4xvNCM8uA==

emerg

f5588832 Location:

Variable Format: character

Notes: UNF:6:6sN7ktOicZozZX1lgbJKeQ==

drain

f5588832 Location:

Variable Format: character

Notes: UNF:6:F5o6FGocmN3LXH7VjeEoFQ==

bleed

f5588832 Location:

Variable Format: character

Notes: UNF:6:xcB0h31Sxwj5GzHCiwuPUA==

mvmt

f5588832 Location:

Variable Format: character

Notes: UNF:6:cmgKx0JyDN0EhBgMPGdWUQ==

n_oedema

f5588832 Location:

Variable Format: character

Notes: UNF:6:nGGhDYLrk/u1xHR3ydoqQA==

n_dysuria

f5588832 Location:

Variable Format: character

Notes: UNF:6:t3hjtn06AmhL0L52GaWE6w==

n_fever

f5588832 Location:

Variable Format: character

Notes: UNF:6:PubbcFNOYDQ6rjW3x7ExbQ==

n_first

f5588832 Location:

Variable Format: character

Notes: UNF:6:wrkcozf3pufHkJNjWcJSuA==

n_antibio4

f5588832 Location:

Variable Format: character

Notes: UNF:6:DpPt4rCEDSCYXE2Dwu7WxA==

n_temp

f5588832 Location:

Summary Statistics: Max. 39.5; Mean 36.48732924720497; StDev 0.6123224440383882; Min. 31.1; Valid 805.0;

Variable Format: numeric

Notes: UNF:6:DXPX4E2R8muv7bFUIn/c4A==

n_weight

f5588832 Location:

Summary Statistics: Mean 62.4119338013245; StDev 13.835026659974062; Valid 755.0; Min. 37.799999; Max. 173.0

Variable Format: numeric

Notes: UNF:6:QiUK/1eIWFe6lc0YKbjkiA==

n_height

f5588832 Location:

Summary Statistics: Max. 188.0; StDev 11.585374354444085; Valid 569.0; Mean 154.7234095606327; Min. 60.5;

Variable Format: numeric

Notes: UNF:6:m4FfSXMaj0VhwcL6Sxhz8A==

n_muac

f5588832 Location:

Summary Statistics: Max. 43.5; StDev 3.4392749620975773; Valid 817.0; Min. 10.6; Mean 25.996083266829867

Variable Format: numeric

Notes: UNF:6:vPAZ1Ra7utvcvQMypnF4ng==

temp_cat

f5588832 Location:

Variable Format: character

Notes: UNF:6:Pl0uWfCbki36858CfmcFIg==

score at 1min

f5588833 Location:

Summary Statistics: Min. 2.0; Mean 7.780269058295964; Valid 892.0; StDev 2.0397103553719114; Max. 10.0;

Variable Format: numeric

Notes: UNF:6:li4eGIlVXWlAq7OUcJn4vw==

score at 5min

f5588833 Location:

Summary Statistics: Min. 0.0; Valid 877.0; Max. 10.0; StDev 1.80022760189601; Mean 8.824401368301027;

Variable Format: numeric

Notes: UNF:6:pYbzCfuxj+y7V577FLxVOw==

score at 10min

f5588833 Location:

Summary Statistics: Valid 844.0; Mean 9.39218009478673; Min. 0.0; Max. 19.0; StDev 1.4272340040386466;

Variable Format: numeric

Notes: UNF:6:fG02M+irOd0zBjKz5CiQwg==

year

f5588833 Location:

Summary Statistics: Valid 903.0; Mean 2013.4828349944628; Min. 2011.0; Max. 2016.0; StDev 1.556576756866063

Variable Format: numeric

Notes: UNF:6:7fUvivBV8/b0Abb9EAdhWg==

admission age

f5588833 Location:

Variable Format: character

Notes: UNF:6:+usb8sa0V7OCIVJ8z30UNQ==

temperature

f5588833 Location:

Summary Statistics: Min. 32.0; Mean 36.512603648424545; Valid 603.0; Max. 40.6; StDev 1.5952192968689112;

Variable Format: numeric

Notes: UNF:6:9w+UY/YmRpF6lsyZoDElTQ==

respiratory rate

f5588833 Location:

Summary Statistics: Max. 106.0; Mean 53.55740432612314; Valid 601.0; StDev 17.667779975176497; Min. 0.0

Variable Format: numeric

Notes: UNF:6:EdElOAkZmVuHVM91b33BWQ==

Ever admitted

f5588833 Location:

Value	Label	Frequency
1.	admitted 0-2d life	603
2.	admitted within 60d life	0
0.	none	300

Summary Statistics: Max. 1.0; Min. 0.0; StDev 0.47127254474896535; Valid 903.0; Mean 0.6677740863787375

Variable Format: numeric

Notes: UNF:6:0cLtkYu+nbHoMjupiScFkQ==

Sex coded as 0 Male, 1 Female

f5588833 Location:

Value	Label	Frequency	Text
0.	Male	496
1.	Female	407

Summary Statistics: StDev 0.49784127350876994; Min. 0.0; Mean 0.45071982281284606; Valid 903.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:VMcCx6N13FDyj7P6PCITTQ==

Resuscitation

f5588833 Location:

Value	Label	Frequency
1.	yes	197
2.	missing	4
0.	none	702

Summary Statistics: StDev 0.4295884259882249; Max. 2.0; Mean 0.2270210409745294; Valid 903.0; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:aVU7NCuMPXHnQqAil5q0FA==

history of fever

f5588833 Location:

Value	Label	Frequency
1.	yes	211
0.	no	390
2.	missing	2

Summary Statistics: Max. 2.0; StDev 0.48625906922560297; Mean 0.35655058043117754; Min. 0.0; Valid 603.0

Variable Format: numeric

Notes: UNF:6:EZA+JqyRsoqqxSwtajN9Yw==

difficulty in breathing

f5588833 Location:

Value	Label	Frequency
0.	no	288
2.	missing	2
1.	yes	313

Summary Statistics: StDev 0.5063575474640847; Mean 0.525704809286899; Min. 0.0; Max. 2.0; Valid 603.0

Variable Format: numeric

Notes: UNF:6:w1MmYC9xcgNuPCGMxCR0+w==

convulsions

f5588833 Location:

Value	Label	Frequency
2.	missing	2
1.	yes	14
0.	no	587

Summary Statistics: Min. 0.0; Valid 603.0; Mean 0.0298507462686567; Max. 2.0; StDev 0.1888181751519548

Variable Format: numeric

Notes: UNF:6:HyT7mKNpiPeY6COhszDZhQ==

Respiratory rate categories

f5588833 Location:

Value	Label	Frequency
1.	tachypnoea	229
2.	bradypnoea	40
0.	normal	332
3.	missing	2

Summary Statistics: StDev 0.6346157458183486; Min. 0.0; Valid 603.0; Mean 0.5223880597014923; Max. 3.0

Variable Format: numeric

Notes: UNF:6:DawlNs8XfeyD52qwcvviVw==

cyanosis

f5588833 Location:

Value	Label	Frequency
1.	yes	40
0.	no	561
2.	missing	2

Summary Statistics: Max. 2.0; Min. 0.0; Valid 603.0; Mean 0.07296849087893857; StDev 0.2727654195248789

Variable Format: numeric

Notes: UNF:6:cbTfwbxIHKAh+dqQfqW7Lg==

nasal flaring

f5588833 Location:

Value	Label	Frequency
0.	no	443
1.	yes	158
2.	missing	2

Summary Statistics: Valid 603.0; Max. 2.0; StDev 0.45105563140823607; Mean 0.26865671641791045; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:DGcEgYxA7mqzWgrKgl5CCQ==

chest indrawing

f5588833 Location:

Value	Label	Frequency
2.	missing	2
0.	no	314
1.	yes	287

Summary Statistics: Max. 2.0; Mean 0.48258706467661705; StDev 0.5067110485042284; Min. 0.0; Valid 603.0

Variable Format: numeric

Notes: UNF:6:RRSlFRTrENhMtz7uxdmK1g==

Level of consciousness

f5588833 Location:

Value	Label	Frequency
1.	agitated	6
4.	unconscious	61
3.	prostrate	84
0.	normal	417
2.	lethargic	33
5.	missing	2

Summary Statistics: Mean 0.958540630182421; StDev 1.506334088100765; Min. 0.0; Valid 603.0; Max. 5.0

Variable Format: numeric

Notes: UNF:6:Vh3/sb/fagSTf0UJWlargA==

Birth weight kg

f5588833 Location:

Summary Statistics: StDev 0.7526820130428203; Valid 903.0; Mean 2.680668883611461; Min. 0.4399999976158142; Max. 4.670000076293945

Variable Format: numeric

Notes: UNF:6:XbuIxegRvoFZkAvP62WxNw==

length

f5588833 Location:

Summary Statistics: Min. 30.5; Max. 59.0; Mean 46.822436302075225; StDev 4.372946067631244; Valid 903.0

Variable Format: numeric

Notes: UNF:6:qGiG/jqc7u8QtdjQ4COKEw==

muac

f5588833 Location:

Summary Statistics: Max. 15.100000381469727; StDev 1.5695501519470976; Mean 9.870167403348855; Min. 5.0; Valid 896.0;

Variable Format: numeric

Notes: UNF:6:GwpmY0a8it4nw4R9muiIJA==

head circumference

f5588833 Location:

Summary Statistics: Valid 903.0; Min. 21.299999237060547; Mean 33.14174970413495; Max. 50.0; StDev 2.9723217111721785;

Variable Format: numeric

Notes: UNF:6:vCNHt+HpjEHEY4z69s9elw==

Blood culture genus

f5588833 Location:

Variable Format: character

Notes: UNF:6:S3jbpU3HldxtICplJ5kiJQ==

Blood culture species

f5588833 Location:

Variable Format: character

Notes: UNF:6:7jZHNvJw7T1SmiYl9mlopg==

PROM >18hr

f5588833 Location:

Value	Label	Frequency
2.	missing	156
1.	yes	36
0.	n0	711

Summary Statistics: Max. 2.0; Mean 0.3853820598006646; Valid 903.0; StDev 0.7635596436940775; Min. 0.0

Variable Format: numeric

Notes: UNF:6:sLNAeUL2ko1IEmEhglO0PA==

Mode of delivery

f5588833 Location:

Value	Label	Frequency
0.	vaginal	646
1.	cs	253
2.	missing	4

Summary Statistics: Min. 0.0; Valid 903.0; Mean 0.28903654485049834; Max. 2.0; StDev 0.46324013325452346

Variable Format: numeric

Notes: UNF:6:+INs3fnC9gZ52IuiiH2HPQ==

Difficulty feeding

f5588833 Location:

Value	Label	Frequency
0.	no	234
2.	<missing	2
1.	yes	367

Summary Statistics: Max. 2.0; Valid 603.0; StDev 0.49371403339719927; Min. 0.0; Mean 0.6152570480928691;

Variable Format: numeric

Notes: UNF:6:JB7YP0r2s9RNcOs3Wtw6/Q==

Movement only when stimulated

f5588833 Location:

Value	Label	Frequency
1.	yes	178
0.	no	423
2.	missing	2

Summary Statistics: Max. 2.0; Min. 0.0; Valid 603.0; Mean 0.30182421227197354; StDev 0.4666057427994841

Variable Format: numeric

Notes: UNF:6:tqOolvxqOeWEycD9mxzebQ==

Temp pSBI category

f5588833 Location:

Value	Label	Frequency	Text
1.	<=35.5 & >=37.5	430
0.	>35.5-<37.5	173

Summary Statistics: Mean 0.7131011608623549; Max. 1.0; StDev 0.4526894545283514; Valid 603.0; Min. 0.0

Variable Format: numeric

Notes: UNF:6:WDd6IhhcYYKRySdt2cykeQ==

5 minute apgar score

f5588833 Location:

Value	Label	Frequency
0.	>=9	642
1.	<9	235
2.	missing	26

Summary Statistics: Max. 2.0; Mean 0.3178294573643412; Valid 903.0; StDev 0.5241220573221973; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:3Qo5dlxHPukXVDWlwU7ZXQ==

Urinalysis suggesting UTI

f5588833 Location:

Value	Label	Frequency
1.	yes	154
2.	missing	118
0.	no	631

Summary Statistics: Valid 903.0; Min. 0.0; Max. 2.0; StDev 0.7122319480948145; Mean 0.4318936877076413;

Variable Format: numeric

Notes: UNF:6:t3fsG+Su8NZCPMSBz2bhEg==

gestation

f5588833 Location:

Value	Label	Frequency
0.	>=37	620
1.	<37-32	166
3.	missing	23
2.	<32	94

Summary Statistics: Max. 3.0; Mean 0.46843853820598; StDev 0.7814723286052365; Valid 903.0; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:cJx5SoCcpSxFS/ktqE9j3w==

age at admission

f5588833 Location:

Value	Label	Frequency
0.	0d	349
1.	1d	191
2.	2d	63

Summary Statistics: StDev 0.6775365474886292; Min. 0.0; Valid 603.0; Max. 2.0; Mean 0.525704809286899

Variable Format: numeric

Notes: UNF:6:Tvc4YINPPLxtwE1RLWIxIQ==

psbi

f5588833 Location:

Value	Label	Frequency	Text
0.	no	300
1.	yes	603

Summary Statistics: StDev 0.47127254474896535; Mean 0.6677740863787375; Valid 903.0; Max. 1.0; Min. 0.0

Variable Format: numeric

Notes: UNF:6:0cLtkYu+nbHoMjupiScFkQ==

psbi with outcome

f5588833 Location:

Value	Label	Frequency
1.	psbi, alive	502
2.	psbi, died	101
0.	no psbi	300

Summary Statistics: StDev 0.6292439696753725; Valid 903.0; Min. 0.0; Max. 2.0; Mean 0.7796234772978958

Variable Format: numeric

Notes: UNF:6:L+WSoUQs7/vfxyhhLBs3iA==

apgar1

f5588829 Location:

Summary Statistics: Min. 2.0; Valid 892.0; Max. 10.0; Mean 7.780269058295964; StDev 2.0397103553719114

Variable Format: numeric

Notes: UNF:6:li4eGIlVXWlAq7OUcJn4vw==

apgar5

f5588829 Location:

Summary Statistics: Valid 877.0; StDev 1.80022760189601; Min. 0.0; Mean 8.824401368301027; Max. 10.0

Variable Format: numeric

Notes: UNF:6:pYbzCfuxj+y7V577FLxVOw==

apgar10

f5588829 Location:

Summary Statistics: StDev 1.4272340040386466; Max. 19.0; Min. 0.0; Valid 844.0; Mean 9.39218009478673;

Variable Format: numeric

Notes: UNF:6:fG02M+irOd0zBjKz5CiQwg==

year

f5588829 Location:

Summary Statistics: Min. 2011.0; Mean 2013.4828349944628; Max. 2016.0; Valid 903.0; StDev 1.556576756866063

Variable Format: numeric

Notes: UNF:6:7fUvivBV8/b0Abb9EAdhWg==

age_admin

f5588829 Location:

Summary Statistics: Valid 603.0; Mean 0.525704809286899; StDev 0.6775365474886292; Max. 2.0; Min. 0.0

Variable Format: numeric

Notes: UNF:6:Tvc4YINPPLxtwE1RLWIxIQ==

temp_axilla

f5588829 Location:

Summary Statistics: Valid 603.0; Max. 40.6; Min. 32.0; StDev 1.5952192968689112; Mean 36.512603648424545

Variable Format: numeric

Notes: UNF:6:9w+UY/YmRpF6lsyZoDElTQ==

resp_rate

f5588829 Location:

Summary Statistics: StDev 17.667779975176497; Min. 0.0; Max. 106.0; Mean 53.55740432612314; Valid 601.0;

Variable Format: numeric

Notes: UNF:6:EdElOAkZmVuHVM91b33BWQ==

n_adm

f5588829 Location:

Variable Format: character

Notes: UNF:6:+6ytuN2pEoYRnlM5rlp0Pg==

nsex

f5588829 Location:

Variable Format: character

Notes: UNF:6:dW+FRLhYkIiwsZ+mAURCWA==

resuscit

f5588829 Location:

Variable Format: character

Notes: UNF:6:2ZRrn+nc4vH/ByN/P1ta7A==

nfever

f5588829 Location:

Variable Format: character

Notes: UNF:6:6JfEhAQU3txhEeQRbG65Sw==

nbreathing_diff

f5588829 Location:

Variable Format: character

Notes: UNF:6:I+oHJdkBk6j5nc6DinMC2A==

nconvulsion

f5588829 Location:

Variable Format: character

Notes: UNF:6:3vJnXgJtYXDt14nARdtYxg==

nresp_rate

f5588829 Location:

Variable Format: character

Notes: UNF:6:PLTSy3yMr5tEr7UVI6Zn2A==

ncyanosis

f5588829 Location:

Variable Format: character

Notes: UNF:6:A8iIPmJ+X6P+O4E5tya7XA==

nflaring

f5588829 Location:

Variable Format: character

Notes: UNF:6:Nv5GnPq6b6pmIlLq/YY/8w==

nindrawing

f5588829 Location:

Variable Format: character

Notes: UNF:6:WbaYmSNBfRsw67ITwF3elA==

n_conscious

f5588829 Location:

Variable Format: character

Notes: UNF:6:fq0p+TqclTTuDUygCdD0hg==

nweight

f5588829 Location:

Summary Statistics: Min. 0.44; Mean 2.680668883532669; Max. 4.6700001; StDev 0.7526820142784872; Valid 903.0;

Variable Format: numeric

Notes: UNF:6:XbuIxegRvoFZkAvP62WxNw==

nlength

f5588829 Location:

Summary Statistics: StDev 4.372946061797627; Min. 30.5; Mean 46.822436295681065; Valid 903.0; Max. 59.0

Variable Format: numeric

Notes: UNF:6:qGiG/jqc7u8QtdjQ4COKEw==

nmuac

f5588829 Location:

Summary Statistics: Mean 9.87016741049107; Min. 5.0; Max. 15.1; Valid 896.0; StDev 1.5695501565117667

Variable Format: numeric

Notes: UNF:6:GwpmY0a8it4nw4R9muiIJA==

nhead_circ

f5588829 Location:

Summary Statistics: StDev 2.972321711149816; Mean 33.1417497021041; Max. 50.0; Min. 21.299999; Valid 903.0

Variable Format: numeric

Notes: UNF:6:vCNHt+HpjEHEY4z69s9elw==

bld_genus

f5588829 Location:

Variable Format: character

Notes: UNF:6:1scGwz3eW+ecap2XvfYYgQ==

bld_species

f5588829 Location:

Variable Format: character

Notes: UNF:6:hiZmRiOw5VqL0p+WovxxWg==

prom

f5588829 Location:

Variable Format: character

Notes: UNF:6:2N0CngHnX12C5fMikrL6FA==

m_deliv

f5588829 Location:

Variable Format: character

Notes: UNF:6:EVuYnrH1+QmdWvLL/0HIkg==

feed_diff

f5588829 Location:

Variable Format: character

Notes: UNF:6:XJPhg46P0V6qqXTfi7hF8A==

mvmt

f5588829 Location:

Variable Format: character

Notes: UNF:6:pVgQolJlUi7mqQULNGqgGg==

temp_psbi

f5588829 Location:

Variable Format: character

Notes: UNF:6:Y3meWXu8l+4wEylqQv45zA==

apg5

f5588829 Location:

Variable Format: character

Notes: UNF:6:/nUDqtv1DxAfF4kCRrYl3A==

uti

f5588829 Location:

Variable Format: character

Notes: UNF:6:sx5+N+icCnpNgKhWL3dXUQ==

gbd

f5588829 Location:

Variable Format: character

Notes: UNF:6:iukbz8IAfuYVE7yzC8lhWA==

age_d

f5588829 Location:

Summary Statistics: Max. 2.0; StDev 0.6775365474886292; Valid 603.0; Min. 0.0; Mean 0.525704809286899

Variable Format: numeric

Notes: UNF:6:Tvc4YINPPLxtwE1RLWIxIQ==

psbi_1

f5588829 Location:

Variable Format: character

Notes: UNF:6:NF0naYRbUzoKRGMtbUcJ9g==

psbi_2

f5588829 Location:

Variable Format: character

Notes: UNF:6:TNizrHrrrUj7F0ltEvcxAA==

A. baumanii ct1

f5588974 Location:

Summary Statistics: Max. 33.819969177246094; Mean 33.819969177246094; Valid 1.0; Min. 33.819969177246094; StDev 0.0

Variable Format: numeric

Notes: UNF:6:Dn4LmynByAZGuuUU0aPHMg==

A. baumanii ct2

f5588974 Location:

Summary Statistics: Valid 4.0; Max. 38.30762481689453; Min. 33.026058197021484; StDev 2.279236022107999; Mean 35.02800369262695;

Variable Format: numeric

Notes: UNF:6:RTDR4LtE1yETfAn0X7z/ww==

Bacterial 16S

f5588974 Location:

Summary Statistics: StDev 1.3415580057547356; Mean 26.070607812864544; Min. 7.59119176864624; Max. 29.146278381347656; Valid 902.0

Variable Format: numeric

Notes: UNF:6:B7dbk7VCQbGDrfq+5ktwOg==

ctx-M

f5588974 Location:

Summary Statistics: Mean 36.102592121471055; Min. 32.991580963134766; Max. 39.373348236083984; Valid 11.0; StDev 1.6191601338471047

Variable Format: numeric

Notes: UNF:6:KOQO7EfmYorA+E7WpOaX9g==

CMV ct1

f5588974 Location:

Summary Statistics: StDev 3.024660893091314; Valid 23.0; Min. 25.42194175720215; Max. 38.89190673828125; Mean 34.14348013504706;

Variable Format: numeric

Notes: UNF:6:rcDnjRv8nHMgm3F/FcnD+Q==

CMV ct2

f5588974 Location:

Summary Statistics: Valid 23.0; Max. 38.61381912231445; Mean 33.82756797127076; StDev 3.0397800056056274; Min. 23.79631996154785

Variable Format: numeric

Notes: UNF:6:F5dgo/B/ZccJliiqr0pjXg==

E. coli/Shig ct1

f5588974 Location:

Summary Statistics: Valid 23.0; StDev 3.3246847392700434; Max. 36.97985076904297; Min. 19.954559326171875; Mean 33.9180776347285

Variable Format: numeric

Notes: UNF:6:0XxR4j9MUn3biCNCaPx5fQ==

E. coli/Shig ct2

f5588974 Location:

Summary Statistics: Min. 19.876117706298828; StDev 3.274378436114943; Max. 37.050228118896484; Valid 24.0; Mean 33.93743069966615;

Variable Format: numeric

Notes: UNF:6:R0VhJl097izVIA0KpzfRkQ==

E. faecalis ct1

f5588974 Location:

Summary Statistics: Mean 34.22242991129557; StDev 1.4377088528876707; Valid 3.0; Min. 32.56233215332031; Max. 35.0604362487793

Variable Format: numeric

Notes: UNF:6:AOla/UpQOq+t9cvN0ava4Q==

E. faecalis ct2

f5588974 Location:

Summary Statistics: StDev 1.90906553922285; Max. 34.75980758666992; Valid 3.0; Min. 31.31336784362793; Mean 33.51094500223795

Variable Format: numeric

Notes: UNF:6:YHal7xNJuv1OIuVeMyWucw==

Enterovirus ct1

f5588974 Location:

Summary Statistics: Mean 36.12448310852051; StDev 1.3167310770241567; Min. 34.93686294555664; Valid 4.0; Max. 37.94893264770508;

Variable Format: numeric

Notes: UNF:6:RaYsg3imhza1mqsmBrFm0g==

Enterovirus ct2

f5588974 Location:

Summary Statistics: Min. 35.68626403808594; Max. 36.97492599487305; Mean 36.160970052083336; StDev 0.7081527344837341; Valid 3.0;

Variable Format: numeric

Notes: UNF:6:mTEt00Gmj9R8vNHPBMt0qg==

H. influenzae ct1

f5588974 Location:

Summary Statistics: Max. 39.738121032714844; StDev 0.0; Valid 1.0; Mean 39.738121032714844; Min. 39.738121032714844

Variable Format: numeric

Notes: UNF:6:v1fmYYxw2PbRK1n4Gas90g==

H. influenzae ct2

f5588974 Location:

Summary Statistics: Min. NaN; Mean NaN; StDev NaN; Valid 0.0; Max. NaN

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

Hs99999901_s1

f5588974 Location:

Summary Statistics: Valid 903.0; Mean 7.540842834633182; StDev 2.092073705819399; Min. 4.638561248779297; Max. 34.70050048828125

Variable Format: numeric

Notes: UNF:6:tGZtfEzwLdwn7SD7DPYD6A==

hsv_1 ct1

f5588974 Location:

Summary Statistics: Mean 33.78742599487305; Valid 1.0; StDev 0.0; Max. 33.78742599487305; Min. 33.78742599487305;

Variable Format: numeric

Notes: UNF:6:qy4BNQUbSLSiIGbioglQwg==

hsv_1 ct2

f5588974 Location:

Summary Statistics: StDev 0.0; Valid 1.0; Min. 33.99446105957031; Max. 33.99446105957031; Mean 33.99446105957031;

Variable Format: numeric

Notes: UNF:6:YqXJEWq6r1nggOTiwkmBpQ==

hsv_2 ct1

f5588974 Location:

Summary Statistics: Max. 37.92099380493164; Min. 37.92099380493164; Valid 1.0; Mean 37.92099380493164; StDev 0.0;

Variable Format: numeric

Notes: UNF:6:N1qMIp3kV7b7zLNxKrrurw==

hsv_2 ct2

f5588974 Location:

Summary Statistics: Mean 39.1887321472168; StDev 0.0; Min. 39.1887321472168; Max. 39.1887321472168; Valid 1.0;

Variable Format: numeric

Notes: UNF:6:NtpY3ppnOaM1U1kTg/PvXA==

k. oxytoca ct1

f5588974 Location:

Summary Statistics: StDev 0.6312186878451151; Valid 48.0; Mean 34.86820856730143; Min. 33.770381927490234; Max. 36.79610061645508

Variable Format: numeric

Notes: UNF:6:YC2rKHB2fPEQcOy2n3jpgQ==

k. oxytoca ct2

f5588974 Location:

Summary Statistics: Mean 34.73982840317946; Max. 37.835079193115234; Min. 32.97358703613281; Valid 52.0; StDev 0.8609804754229722

Variable Format: numeric

Notes: UNF:6:Bdmdirm2Bm+iYIDQxcnl4g==

k. pneumoniae ct1

f5588974 Location:

Summary Statistics: Min. 29.29043960571289; StDev 2.5749279752214833; Max. 36.574928283691406; Valid 7.0; Mean 35.05414853777204

Variable Format: numeric

Notes: UNF:6:zdWawWI7BgavwoN9lITNBw==

k. pneumoniae ct2

f5588974 Location:

Summary Statistics: Mean 36.01832723617554; Max. 39.49064636230469; StDev 4.762831712827238; Valid 4.0; Min. 29.033876419067383

Variable Format: numeric

Notes: UNF:6:RSIJ/fLudK7/KXVYHEP8Mg==

l. monocytogenes ct1

f5588974 Location:

Summary Statistics: Mean NaN; Valid 0.0; Max. NaN; StDev NaN; Min. NaN

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

l. monocytogenes ct2

f5588974 Location:

Summary Statistics: Min. NaN; Valid 0.0; StDev NaN; Max. NaN; Mean NaN

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

m. tuberculosis ct1

f5588974 Location:

Summary Statistics: Valid 0.0; Min. NaN; StDev NaN; Mean NaN; Max. NaN;

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

m. tuberculosis ct2

f5588974 Location:

Summary Statistics: Max. NaN; StDev NaN; Mean NaN; Valid 0.0; Min. NaN;

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

ms2_ct1

f5588974 Location:

Summary Statistics: Mean 27.64194543021065; Valid 903.0; Min. 24.551847457885742; Max. 34.91297912597656; StDev 1.0341572602594487

Variable Format: numeric

Notes: UNF:6:GMJu350UbZjwy1+mhUM8rw==

ms2_ct1

f5588974 Location:

Summary Statistics: Max. 37.82575225830078; Min. 24.762889862060547; Mean 27.70038962760241; Valid 903.0; StDev 1.0355616542012225;

Variable Format: numeric

Notes: UNF:6:xINA7BlUzq/lz9Y4Jxex6Q==

n. meningitidis ct1

f5588974 Location:

Summary Statistics: Max. 39.065120697021484; StDev 0.7100415505420581; Min. 38.060970306396484; Valid 2.0; Mean 38.563045501708984

Variable Format: numeric

Notes: UNF:6:HggE/avyGhLYW3zlRIVxeA==

n. meningitidis ct2

f5588974 Location:

Summary Statistics: Valid 2.0; Mean 36.54763603210449; Min. 35.23099899291992; Max. 37.86427307128906; StDev 1.8620059575375756

Variable Format: numeric

Notes: UNF:6:0/8Z0v85lnHUesv+dZ1BkQ==

p. aeruginosa ct1

f5588974 Location:

Summary Statistics: Mean 34.58345086233957; Max. 39.913726806640625; Min. 28.88842010498047; StDev 2.2384313201733095; Valid 21.0

Variable Format: numeric

Notes: UNF:6:RoDui5IIoXGILr0uxzjRZg==

p. aeruginosa ct2

f5588974 Location:

Summary Statistics: Max. 37.83863067626953; StDev 1.579286378081514; Mean 34.62303011040939; Valid 38.0; Min. 29.130632400512695

Variable Format: numeric

Notes: UNF:6:yudo1gI0zTioriRCVzlvYg==

phHV ct1

f5588974 Location:

Summary Statistics: Min. 21.150636672973633; Valid 903.0; StDev 2.2394225812111075; Mean 23.977363626558265; Max. 33.59650039673;

Variable Format: numeric

Notes: UNF:6:r+W0Rxrkw8t2p4WWyPYmEg==

phHV ct2

f5588974 Location:

Summary Statistics: Mean 23.853241420927507; Max. 31.176921844482422; Min. 20.45690155029297; StDev 2.169433656059093; Valid 903.0

Variable Format: numeric

Notes: UNF:6:C+H96TiXPqme173beEDYug==

plasmodium ct

f5588974 Location:

Summary Statistics: Valid 7.0; Max. 39.533477783203125; Min. 18.193714141845703; StDev 7.571070747562711; Mean 30.333944865635463;

Variable Format: numeric

Notes: UNF:6:fKrUJCkCq8RVQo58KKSFuQ==

s. agalactiae ct1

f5588974 Location:

Summary Statistics: Mean 35.33337838309152; Valid 7.0; Max. 39.12548065185547; StDev 1.955753508345862; Min. 32.610504150390625

Variable Format: numeric

Notes: UNF:6:HZen1HXEWBSrLgXSSCmnEQ==

s. agalactiae ct2

f5588974 Location:

Summary Statistics: StDev 1.2116055608847018; Min. 32.882232666015625; Mean 34.92969195048014; Valid 6.0; Max. 36.36859893798828;

Variable Format: numeric

Notes: UNF:6:cm7XO6nL5ZWQIhKFson3fQ==

s. aureus ct1

f5588974 Location:

Summary Statistics: Min. 37.9972038269043; StDev 0.0; Mean 37.9972038269043; Valid 1.0; Max. 37.9972038269043

Variable Format: numeric

Notes: UNF:6:R2E22Y6fKLirnWbVKotWqw==

s. aureus ct2

f5588974 Location:

Summary Statistics: Mean 38.18223571777344; Max. 38.18223571777344; StDev 0.0; Valid 1.0; Min. 38.18223571777344;

Variable Format: numeric

Notes: UNF:6:O1qCw8x2iygmqYP5hSq1ZQ==

s. pneumoniae ct1

f5588974 Location:

Summary Statistics: Min. 32.275535583496094; Mean 32.735443115234375; Max. 33.195350646972656; Valid 2.0; StDev 0.650407468821812

Variable Format: numeric

Notes: UNF:6:0rX4Ej9YghCkrDbachYXbw==

s. pneumoniae ct2

f5588974 Location:

Summary Statistics: Max. 35.072086334228516; Valid 3.0; StDev 1.9807191247567968; Min. 31.339202880859375; Mean 33.588460286458336

Variable Format: numeric

Notes: UNF:6:Uch/yVrdbR/A5CsQJAWpXA==

s. pyogenes ct1

f5588974 Location:

Summary Statistics: Min. 28.388948440551758; StDev 3.0569895270865826; Mean 37.052651318636805; Max. 39.18532180786133; Valid 11.0

Variable Format: numeric

Notes: UNF:6:zP+OpOZG7HYF/HVPKSkVsg==

s. pyogenes ct2

f5588974 Location:

Summary Statistics: Min. 28.084903717041016; StDev 2.707322972641546; Max. 39.975643157958984; Mean 37.34555358886719; Valid 20.0

Variable Format: numeric

Notes: UNF:6:aGrcro/gojsnWO9Sv6Nxxw==

salmonella ct1

f5588974 Location:

Summary Statistics: Min. 30.397863388061523; Valid 3.0; Max. 38.68266677856445; StDev 4.3114689057492175; Mean 35.230499903361

Variable Format: numeric

Notes: UNF:6:b/lme06h8VOU9XHaQX9g8w==

salmonella ct2

f5588974 Location:

Summary Statistics: Mean 34.227508544921875; Valid 2.0; Max. 36.60892105102539; Min. 31.84609603881836; StDev 3.367825863736493

Variable Format: numeric

Notes: UNF:6:cZ86vB1HjxaF8E3ydHFhdw==

card

f5588974 Location:

Summary Statistics: Mean 61.84606866002215; StDev 34.54056395388594; Valid 903.0; Min. 1.0; Max. 121.0;

Variable Format: numeric

Notes: UNF:6:LHa7m5T6VF6AdCc+1sEZSQ==

A. baumani

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	899
1.	positive	4

Summary Statistics: Mean 0.0044296788482835045; Min. 0.0; Max. 1.0; StDev 0.06644505995033471; Valid 903.0;

Variable Format: numeric

Notes: UNF:6:t90GweiEqZcUE1SaFnsdog==

CMV

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	876
1.	positive	27

Summary Statistics: StDev 0.17040674905014921; Mean 0.029900332225913616; Valid 903.0; Min. 0.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:NKBoyDYxK/HoUIZ+J3C0vw==

E. coli/Shigella

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	865
1.	positive	38

Summary Statistics: Max. 1.0; Mean 0.04208194905869318; Valid 903.0; Min. 0.0; StDev 0.20088740471833363

Variable Format: numeric

Notes: UNF:6:Wyv7qUiLauEjc7sy1lKhLA==

E. faecalis

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	899
1.	positive	4

Summary Statistics: StDev 0.06644505995033473; Valid 903.0; Max. 1.0; Min. 0.0; Mean 0.0044296788482834975

Variable Format: numeric

Notes: UNF:6:/AK2VuUp60LIgPhltwqIiQ==

Enterovirus

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	6
0.	negative	897

Summary Statistics: Mean 0.006644518272425219; StDev 0.08128767514959176; Min. 0.0; Valid 903.0; Max. 1.0;

Variable Format: numeric

Notes: UNF:6:vuE62vSlE8IJwd9HHzSCqg==

H. influenzae

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	1
0.	negative	902

Summary Statistics: Mean 0.001107419712070873; Valid 903.0; Min. 0.0; Max. 1.0; StDev 0.03327791628198633;

Variable Format: numeric

Notes: UNF:6:obl0++uYyvsPX68XSSx4TQ==

HSV 1

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	2
0.	negative	901

Summary Statistics: Mean 0.0022148394241417414; Min. 0.0; Max. 1.0; StDev 0.04703598567120503; Valid 903.0

Variable Format: numeric

Notes: UNF:6:OSaRN+p3AJaIzhdYI9Ml8w==

HSV 2

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	2
0.	negative	901

Summary Statistics: Min. 0.0; Mean 0.0022148394241417345; Max. 1.0; Valid 903.0; StDev 0.04703598567120513

Variable Format: numeric

Notes: UNF:6:Ix8O2g5SSVpBYDKFfmNnTg==

K. oxytoca

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	97
0.	negative	806

Summary Statistics: Mean 0.10741971207087465; Max. 1.0; Valid 903.0; StDev 0.30981771324843643; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:34rUD8xkWNa6VaRpccsHww==

K. pneumoniae

f5588974 Location:

Summary Statistics: Min. 0.0; Mean 0.011074197120708767; Max. 1.0; StDev 0.10470769168074379; Valid 903.0

Variable Format: numeric

Notes: UNF:6:f/q26mkOWowXkIbqK2VDzg==

L. monocytogenes

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	903
1.	positive	0

Summary Statistics: Mean 0.0; StDev 0.0; Valid 903.0; Min. 0.0; Max. 0.0

Variable Format: numeric

Notes: UNF:6:/sMhWUXTgIsSy6DrYK+OEQ==

M. tuberculosis

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	0
0.	negative	903

Summary Statistics: StDev 0.0; Valid 903.0; Max. 0.0; Min. 0.0; Mean 0.0;

Variable Format: numeric

Notes: UNF:6:/sMhWUXTgIsSy6DrYK+OEQ==

N. meningitidis

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	3
0.	negative	900

Summary Statistics: Mean 0.003322259136212629; Max. 1.0; Min. 0.0; StDev 0.05757510493236345; Valid 903.0

Variable Format: numeric

Notes: UNF:6:hbbnaXC7f3xP3vRa4fjkhg==

P. aeruginosa

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	53
0.	negative	850

Summary Statistics: Valid 903.0; Max. 1.0; Min. 0.0; StDev 0.23517992835602358; Mean 0.05869324473975639;

Variable Format: numeric

Notes: UNF:6:G4asscRpy8FTQZbE3fgYiw==

Plasmodium

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	896
1.	positive	7

Summary Statistics: Mean 0.007751937984496113; Min. 0.0; Max. 1.0; Valid 903.0; StDev 0.08775176913781549

Variable Format: numeric

Notes: UNF:6:ZlFqWTXKjbNfr7/a2P/oIw==

S. agalactiae

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	896
1.	positive	7

Summary Statistics: Mean 0.007751937984496112; StDev 0.08775176913781552; Min. 0.0; Max. 1.0; Valid 903.0

Variable Format: numeric

Notes: UNF:6:OPV8JMOBWcgH6rpItxqa8w==

S. aureus

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	2
0.	negative	901

Summary Statistics: Max. 1.0; Mean 0.002214839424141754; Valid 903.0; Min. 0.0; StDev 0.04703598567120545

Variable Format: numeric

Notes: UNF:6:QjFMoP3CL9k5cm3BYw+JcQ==

S. pneumoniae

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	4
0.	negative	899

Summary Statistics: StDev 0.06644505995033477; Max. 1.0; Mean 0.0044296788482835045; Min. 0.0; Valid 903.0

Variable Format: numeric

Notes: UNF:6:qr8CXj0nDCEmrmtDmyHDQQ==

S. pyogenes

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	29
0.	negative	874

Summary Statistics: Valid 903.0; Min. 0.0; Max. 1.0; Mean 0.032115171650055487; StDev 0.1764036517807477;

Variable Format: numeric

Notes: UNF:6:Y5CsMOMKUEUpALcfcBsIdA==

Salmonella

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	899
1.	positive	4

Summary Statistics: StDev 0.06644505995033467; Min. 0.0; Mean 0.00442967884828347; Max. 1.0; Valid 903.0

Variable Format: numeric

Notes: UNF:6:0R46k47zaOnIuvz03L55hg==

pSBI no/yes

f5588974 Location:

Value	Label	Frequency	Text
1.	psbi	603
0.	no psbi	300

Summary Statistics: Valid 903.0; Mean 0.6677740863787375; StDev 0.47127254474896535; Max. 1.0; Min. 0.0

Variable Format: numeric

Notes: UNF:6:0cLtkYu+nbHoMjupiScFkQ==

pSBI no/yes alive/yes died

f5588974 Location:

Value	Label	Frequency
0.	no psbi	300
1.	psbi, alive	502
2.	psbi, died	101

Summary Statistics: Valid 903.0; Min. 0.0; Mean 0.7796234772978958; Max. 2.0; StDev 0.6292439696753725

Variable Format: numeric

Notes: UNF:6:L+WSoUQs7/vfxyhhLBs3iA==

admission bld culture

f5588974 Location:

Value	Label	Frequency
1.	pathogen	11
2.	contaminant	37
0.	negative	555

Summary Statistics: StDev 0.4941825058023207; Max. 2.0; Valid 603.0; Min. 0.0; Mean 0.14096185737976774

Variable Format: numeric

Notes: UNF:6:VsHXK6uNRadfZEHipDtWhg==

weight

f5588974 Location:

Summary Statistics: Min. 1.0; Valid 903.0; StDev 9.41602522835294; Mean 7.637873602071872; Max. 20.979999542236328

Variable Format: numeric

Notes: UNF:6:Y95qTg5oRzxNY27PIzMf4g==

f5588974 Location:

Summary Statistics: Min. 0.0; StDev 0.27943978746670267; Mean 0.08527131782945727; Valid 903.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:9dZd5qieytp/p8jNgc7gZA==

Pattern 1

f5588974 Location:

Value	Label	Frequency	Text
1.	pos	18
0.	neg	885

Summary Statistics: Valid 903.0; StDev 0.13984944396399737; Max. 1.0; Mean 0.019933554817275802; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:FL1BxyQVI//P8lpAudMWLg==

Pattern 2

f5588974 Location:

Value	Label	Frequency	Text
0.	neg	876
1.	pos	27

Summary Statistics: Valid 903.0; Max. 1.0; Mean 0.029900332225913647; StDev 0.17040674905014944; Min. 0.0

Variable Format: numeric

Notes: UNF:6:Uonf2VPhaXbegWZ0Vs2p4g==

Pattern 3

f5588974 Location:

Value	Label	Frequency	Text
1.	pos	193
0.	neg	710

Summary Statistics: Valid 903.0; Mean 0.21373200442967877; StDev 0.4101669704154802; Max. 1.0; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:dmt7EE2RffPFYLYlQUmvuw==

Ureaplasma ct1

f5588974 Location:

Summary Statistics: Valid 118.0; Mean 36.793497748294115; StDev 2.618101682953542; Min. 27.817523956298828; Max. 39.94985580444336;

Variable Format: numeric

Notes: UNF:6:VtyPmhqdwcjK9vS0t8gt/Q==

Ureaplasma ct2

f5588974 Location:

Summary Statistics: StDev 2.4924718945374176; Min. 27.980121612548828; Mean 36.22326478725526; Max. 39.998233795166016; Valid 123.0

Variable Format: numeric

Notes: UNF:6:o1gZ3QPLAach6jgKZYTODA==

Uniplex PCR Ct

f5588974 Location:

Summary Statistics: Mean 32.11988872951932; Min. 26.81100082397461; StDev 2.6274633017357383; Max. 37.2239990234375; Valid 18.0

Variable Format: numeric

Notes: UNF:6:bG2n6yPOdH3erU8bmuivSA==

Final Ureaplasma after repeats

f5588974 Location:

Value	Label	Frequency	Text
0.	neg	881
1.	pos	18

Summary Statistics: StDev 0.14015422445103548; Min. 0.0; Mean 0.02002224694104528; Max. 1.0; Valid 899.0

Variable Format: numeric

Notes: UNF:6:XgoWU20WWmDy7ZEyQiibkg==

Taq results

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	645
1.	positive	258

Summary Statistics: Mean 0.2857142857142852; Valid 903.0; StDev 0.45200430001795; Min. 0.0; Max. 1.0;

Variable Format: numeric

Notes: UNF:6:7jjDvtgs/F8JL3hKBaO4IQ==

All bacteria

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	228
0.	negative	675

Summary Statistics: Min. 0.0; Mean 0.25249169435215973; StDev 0.43468250983268614; Valid 903.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:a4AC8hyFS6Br6bU6ogdYsA==

All bacteria except contaminants

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	794
1.	positive	109

Summary Statistics: Min. 0.0; Mean 0.12070874861572556; Max. 1.0; Valid 903.0; StDev 0.32596904210210637

Variable Format: numeric

Notes: UNF:6:ksggieIMAOFIQymoMSgI1A==

All viruses

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	37
0.	negative	866

Summary Statistics: Max. 1.0; Min. 0.0; StDev 0.19834107561812614; Valid 903.0; Mean 0.040974529346622365

Variable Format: numeric

Notes: UNF:6:Ul9KnK2NnKl9GqbenQKWYQ==

Any target

f5588974 Location:

Value	Label	Frequency	Text
0.	negative	645
1.	positive	258

Summary Statistics: StDev 0.45200430001795; Max. 1.0; Mean 0.2857142857142852; Valid 903.0; Min. 0.0

Variable Format: numeric

Notes: UNF:6:7jjDvtgs/F8JL3hKBaO4IQ==

Any target except contam

f5588974 Location:

Value	Label	Frequency	Text
1.	positive	145
0.	negative	758

Summary Statistics: Mean 0.16057585825027657; Valid 903.0; Min. 0.0; Max. 1.0; StDev 0.3673427391078915;

Variable Format: numeric

Notes: UNF:6:MypdwQAqF/3OXPr9KAdaDA==

Multiple pos

f5588974 Location:

Value	Label	Frequency	Text
1.	yes	48
0.	no	855

Summary Statistics: StDev 0.2244690828626187; Mean 0.05315614617940187; Min. 0.0; Valid 903.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:mud+Lo/1SO0d2QekKswkdg==

Pattern 4

f5588974 Location:

Value	Label	Frequency	Text
0.	neg	850
1.	pos	53

Summary Statistics: Min. 0.0; Max. 1.0; Mean 0.05869324473975602; Valid 903.0; StDev 0.2351799283560236

Variable Format: numeric

Notes: UNF:6:QmrsnajWY1ZmcB0Rg+FNfA==

Cases survived vs died

f5588974 Location:

Value	Label	Frequency	Text
0.	survived	502
1.	died	101

Summary Statistics: Max. 1.0; Min. 0.0; Mean 0.16749585406301823; Valid 603.0; StDev 0.373728006029902;

Variable Format: numeric

Notes: UNF:6:x9vFDK5Dc1fBONREryuiqw==

admission bld culture 2

f5588974 Location:

Value	Label	Frequency	Text
1.	pathogen	11
0.	negative	592

Summary Statistics: Max. 1.0; StDev 0.13393691584244813; Min. 0.0; Mean 0.018242122719734636; Valid 603.0

Variable Format: numeric

Notes: UNF:6:R/vr1jsjV1/WVpHzkfTypA==

a_baum1

f5588973 Location:

Summary Statistics: Min. 33.81996917724609; Valid 1.0; Max. 33.81996917724609; StDev 0.0; Mean 33.81996917724609;

Variable Format: numeric

Notes: UNF:6:Dn4LmynByAZGuuUU0aPHMg==

a_baum2

f5588973 Location:

Summary Statistics: Valid 4.0; Min. 33.02605819702148; Max. 38.30762481689453; Mean 35.02800369262695; StDev 2.2792360221080004

Variable Format: numeric

Notes: UNF:6:RTDR4LtE1yETfAn0X7z/ww==

bact_16s

f5588973 Location:

Summary Statistics: Mean 26.070607812864544; StDev 1.3415580057547354; Max. 29.14627838134766; Valid 902.0; Min. 7.59119176864624

Variable Format: numeric

Notes: UNF:6:B7dbk7VCQbGDrfq+5ktwOg==

ctx_m

f5588973 Location:

Summary Statistics: Max. 39.37334823608398; Mean 36.10259212147106; Valid 11.0; StDev 1.6191601338471013; Min. 32.99158096313477

Variable Format: numeric

Notes: UNF:6:KOQO7EfmYorA+E7WpOaX9g==

cmv_1

f5588973 Location:

Summary Statistics: Max. 38.89190673828125; Mean 34.14348013504706; Min. 25.42194175720215; StDev 3.0246608930913137; Valid 23.0;

Variable Format: numeric

Notes: UNF:6:rcDnjRv8nHMgm3F/FcnD+Q==

cmv_2

f5588973 Location:

Summary Statistics: Min. 23.79631996154785; StDev 3.039780005605627; Max. 38.61381912231445; Valid 23.0; Mean 33.82756797127076

Variable Format: numeric

Notes: UNF:6:F5dgo/B/ZccJliiqr0pjXg==

ecoli_shig_1

f5588973 Location:

Summary Statistics: StDev 3.3246847392700425; Max. 36.97985076904297; Min. 19.95455932617188; Mean 33.9180776347285; Valid 23.0;

Variable Format: numeric

Notes: UNF:6:0XxR4j9MUn3biCNCaPx5fQ==

ecoli_shig_2

f5588973 Location:

Summary Statistics: Valid 24.0; Min. 19.87611770629883; StDev 3.274378436114942; Mean 33.93743069966615; Max. 37.05022811889648;

Variable Format: numeric

Notes: UNF:6:R0VhJl097izVIA0KpzfRkQ==

e_faec1

f5588973 Location:

Summary Statistics: StDev 1.4377088528876707; Min. 32.56233215332031; Max. 35.0604362487793; Mean 34.22242991129557; Valid 3.0

Variable Format: numeric

Notes: UNF:6:AOla/UpQOq+t9cvN0ava4Q==

e_faec2

f5588973 Location:

Summary Statistics: StDev 1.909065539222852; Min. 31.31336784362793; Valid 3.0; Max. 34.75980758666992; Mean 33.51094500223796

Variable Format: numeric

Notes: UNF:6:YHal7xNJuv1OIuVeMyWucw==

enterov_1

f5588973 Location:

Summary Statistics: Mean 36.12448310852051; StDev 1.3167310770241565; Min. 34.93686294555664; Valid 4.0; Max. 37.94893264770508

Variable Format: numeric

Notes: UNF:6:RaYsg3imhza1mqsmBrFm0g==

enterov_2

f5588973 Location:

Summary Statistics: StDev 0.7081527344837323; Valid 3.0; Min. 35.68626403808594; Mean 36.160970052083336; Max. 36.97492599487305;

Variable Format: numeric

Notes: UNF:6:mTEt00Gmj9R8vNHPBMt0qg==

h_influ1

f5588973 Location:

Summary Statistics: Max. 39.73812103271484; Mean 39.73812103271484; StDev 0.0; Valid 1.0; Min. 39.73812103271484

Variable Format: numeric

Notes: UNF:6:v1fmYYxw2PbRK1n4Gas90g==

h_influ2

f5588973 Location:

Summary Statistics: Mean NaN; Valid 0.0; Max. NaN; StDev NaN; Min. NaN

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

hs9_s1

f5588973 Location:

Summary Statistics: Mean 7.540842834633182; Max. 34.70050048828125; Valid 903.0; Min. 4.638561248779297; StDev 2.092073705819399

Variable Format: numeric

Notes: UNF:6:tGZtfEzwLdwn7SD7DPYD6A==

hsv1_1

f5588973 Location:

Summary Statistics: Max. 33.78742599487305; StDev 0.0; Valid 1.0; Mean 33.78742599487305; Min. 33.78742599487305;

Variable Format: numeric

Notes: UNF:6:qy4BNQUbSLSiIGbioglQwg==

hsv1_2

f5588973 Location:

Summary Statistics: Mean 33.99446105957031; Valid 1.0; Max. 33.99446105957031; StDev 0.0; Min. 33.99446105957031

Variable Format: numeric

Notes: UNF:6:YqXJEWq6r1nggOTiwkmBpQ==

hsv2_1

f5588973 Location:

Summary Statistics: Valid 1.0; Max. 37.92099380493164; Mean 37.92099380493164; StDev 0.0; Min. 37.92099380493164;

Variable Format: numeric

Notes: UNF:6:N1qMIp3kV7b7zLNxKrrurw==

hsv2_2

f5588973 Location:

Summary Statistics: Max. 39.1887321472168; StDev 0.0; Mean 39.1887321472168; Min. 39.1887321472168; Valid 1.0;

Variable Format: numeric

Notes: UNF:6:NtpY3ppnOaM1U1kTg/PvXA==

k_oxy1

f5588973 Location:

Summary Statistics: Min. 33.77038192749023; Mean 34.86820856730143; Max. 36.79610061645508; StDev 0.6312186878451149; Valid 48.0;

Variable Format: numeric

Notes: UNF:6:YC2rKHB2fPEQcOy2n3jpgQ==

k_oxy2

f5588973 Location:

Summary Statistics: Max. 37.83507919311523; Valid 52.0; StDev 0.8609804754229715; Min. 32.97358703613281; Mean 34.739828403179466;

Variable Format: numeric

Notes: UNF:6:Bdmdirm2Bm+iYIDQxcnl4g==

k_pneumo1

f5588973 Location:

Summary Statistics: Mean 35.05414853777204; Min. 29.29043960571289; Valid 7.0; StDev 2.5749279752214846; Max. 36.57492828369141;

Variable Format: numeric

Notes: UNF:6:zdWawWI7BgavwoN9lITNBw==

k_pneumo2

f5588973 Location:

Summary Statistics: Min. 29.03387641906738; Valid 4.0; Max. 39.49064636230469; Mean 36.01832723617554; StDev 4.76283171282724

Variable Format: numeric

Notes: UNF:6:RSIJ/fLudK7/KXVYHEP8Mg==

l_mono1

f5588973 Location:

Summary Statistics: Min. NaN; Mean NaN; StDev NaN; Valid 0.0; Max. NaN;

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

l_mono2

f5588973 Location:

Summary Statistics: Mean NaN; Min. NaN; Max. NaN; Valid 0.0; StDev NaN;

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

m_tb1

f5588973 Location:

Summary Statistics: StDev NaN; Min. NaN; Valid 0.0; Max. NaN; Mean NaN

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

m_tb2

f5588973 Location:

Summary Statistics: Mean NaN; StDev NaN; Valid 0.0; Max. NaN; Min. NaN;

Variable Format: numeric

Notes: UNF:6:1f4N0omnSuNVy8Pp1/t8hg==

ms2_1

f5588973 Location:

Summary Statistics: Min. 24.55184745788574; Valid 903.0; Mean 27.64194543021065; StDev 1.0341572602594484; Max. 34.91297912597656

Variable Format: numeric

Notes: UNF:6:GMJu350UbZjwy1+mhUM8rw==

ms2_2

f5588973 Location:

Summary Statistics: Max. 37.82575225830078; Mean 27.70038962760241; Min. 24.76288986206055; Valid 903.0; StDev 1.0355616542012227;

Variable Format: numeric

Notes: UNF:6:xINA7BlUzq/lz9Y4Jxex6Q==

n_meng1

f5588973 Location:

Summary Statistics: StDev 0.7100415505420581; Mean 38.56304550170898; Max. 39.06512069702148; Min. 38.06097030639648; Valid 2.0;

Variable Format: numeric

Notes: UNF:6:HggE/avyGhLYW3zlRIVxeA==

n_meng2

f5588973 Location:

Summary Statistics: Mean 36.54763603210449; Valid 2.0; Max. 37.86427307128906; StDev 1.8620059575375756; Min. 35.23099899291992;

Variable Format: numeric

Notes: UNF:6:0/8Z0v85lnHUesv+dZ1BkQ==

p_aerug1

f5588973 Location:

Summary Statistics: Mean 34.58345086233957; StDev 2.23843132017331; Max. 39.91372680664063; Valid 21.0; Min. 28.88842010498047

Variable Format: numeric

Notes: UNF:6:RoDui5IIoXGILr0uxzjRZg==

p_aerug2

f5588973 Location:

Summary Statistics: Mean 34.62303011040939; StDev 1.5792863780815147; Valid 38.0; Min. 29.1306324005127; Max. 37.83863067626953

Variable Format: numeric

Notes: UNF:6:yudo1gI0zTioriRCVzlvYg==

phhv_1

f5588973 Location:

Summary Statistics: Min. 21.15063667297363; Valid 903.0; Mean 23.977363626558265; StDev 2.2394225812111075; Max. 33.59650039673;

Variable Format: numeric

Notes: UNF:6:r+W0Rxrkw8t2p4WWyPYmEg==

phhv_2

f5588973 Location:

Summary Statistics: StDev 2.169433656059093; Mean 23.853241420927507; Min. 20.45690155029297; Valid 903.0; Max. 31.17692184448242

Variable Format: numeric

Notes: UNF:6:C+H96TiXPqme173beEDYug==

plasmod

f5588973 Location:

Summary Statistics: StDev 7.571070747562714; Mean 30.333944865635463; Min. 18.1937141418457; Max. 39.53347778320313; Valid 7.0;

Variable Format: numeric

Notes: UNF:6:fKrUJCkCq8RVQo58KKSFuQ==

s_agalact1

f5588973 Location:

Summary Statistics: StDev 1.9557535083458608; Min. 32.61050415039063; Mean 35.333378383091514; Valid 7.0; Max. 39.12548065185547;

Variable Format: numeric

Notes: UNF:6:HZen1HXEWBSrLgXSSCmnEQ==

s_agalact2

f5588973 Location:

Summary Statistics: StDev 1.2116055608846996; Min. 32.88223266601563; Valid 6.0; Mean 34.92969195048015; Max. 36.36859893798828

Variable Format: numeric

Notes: UNF:6:cm7XO6nL5ZWQIhKFson3fQ==

s_aureus1

f5588973 Location:

Summary Statistics: Mean 37.9972038269043; StDev 0.0; Max. 37.9972038269043; Min. 37.9972038269043; Valid 1.0

Variable Format: numeric

Notes: UNF:6:R2E22Y6fKLirnWbVKotWqw==

s_aureus2

f5588973 Location:

Summary Statistics: Mean 38.18223571777344; StDev 0.0; Valid 1.0; Min. 38.18223571777344; Max. 38.18223571777344

Variable Format: numeric

Notes: UNF:6:O1qCw8x2iygmqYP5hSq1ZQ==

s_pneumo1

f5588973 Location:

Summary Statistics: StDev 0.650407468821822; Valid 2.0; Max. 33.19535064697266; Mean 32.735443115234375; Min. 32.27553558349609

Variable Format: numeric

Notes: UNF:6:0rX4Ej9YghCkrDbachYXbw==

s_pneumo2

f5588973 Location:

Summary Statistics: Valid 3.0; Min. 31.33920288085938; StDev 1.9807191247567975; Max. 35.07208633422852; Mean 33.588460286458336

Variable Format: numeric

Notes: UNF:6:Uch/yVrdbR/A5CsQJAWpXA==

s_pyog1

f5588973 Location:

Summary Statistics: Mean 37.05265131863681; Max. 39.18532180786133; StDev 3.056989527086582; Min. 28.38894844055176; Valid 11.0

Variable Format: numeric

Notes: UNF:6:zP+OpOZG7HYF/HVPKSkVsg==

s_pyog2

f5588973 Location:

Summary Statistics: Max. 39.97564315795898; Mean 37.34555358886719; StDev 2.7073229726415446; Min. 28.08490371704102; Valid 20.0

Variable Format: numeric

Notes: UNF:6:aGrcro/gojsnWO9Sv6Nxxw==

salm_1

f5588973 Location:

Summary Statistics: Valid 3.0; Max. 38.68266677856445; StDev 4.311468905749219; Mean 35.230499903361; Min. 30.39786338806152;

Variable Format: numeric

Notes: UNF:6:b/lme06h8VOU9XHaQX9g8w==

salm_2

f5588973 Location:

Summary Statistics: Valid 2.0; Mean 34.227508544921875; Max. 36.60892105102539; Min. 31.84609603881836; StDev 3.367825863736493

Variable Format: numeric

Notes: UNF:6:cZ86vB1HjxaF8E3ydHFhdw==

card

f5588973 Location:

Summary Statistics: Max. 121.0; StDev 34.54056395388594; Mean 61.84606866002215; Valid 903.0; Min. 1.0

Variable Format: numeric

Notes: UNF:6:LHa7m5T6VF6AdCc+1sEZSQ==

ab_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:puFz+LH48egW/GrTApwvxw==

cmv_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:TJ7+47xCYBuQTe4qpVGKwg==

eshi_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:LymDkLugJvrMgWHnpiFcoA==

efaec_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:ypxSY8AbESh0f4eR/IM4PA==

entero_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:7HAt27vDQenvkBn7wfd0eA==

hinflu_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:R+lnyy7AHwaDgrT37Dtqrg==

hsv1_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:hkTcRGHwatsS3SOni/2EDQ==

hsv2_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:9+XSdKatsc0sulKJiUfNnA==

koxy_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:4yiO1Z0phryPdiFw/JGX3g==

kpneumo_40

f5588973 Location:

Summary Statistics: Valid 903.0; StDev 0.10470769168074379; Mean 0.011074197120708767; Min. 0.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:f/q26mkOWowXkIbqK2VDzg==

lmono_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:rpKAofp+/GUqvPWw9TYXWQ==

mtb_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:rpKAofp+/GUqvPWw9TYXWQ==

nmeng_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:J2T0rrryv02MP8M8c6FFyQ==

paeru_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:kwiG4+EkdhqSvOks0MoVXA==

plasm_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:0RIHcrth2REafB6sdKDo4w==

saga_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:Gbk998/Kygkwmr8c8B5fVg==

saur_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:EQ+tndK6OGmYtIBfZNHUtg==

spne_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:/xuxscpVIWxFWp8FKUAZEg==

spyo_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:AZulWEX436KQ9ogY/pG5rg==

salm_40

f5588973 Location:

Variable Format: character

Notes: UNF:6:kXxaJffQ0I6CyNqqyG7qPg==

psbi_1

f5588973 Location:

Variable Format: character

Notes: UNF:6:zPhOYI+vggvpWCQr9cPDog==

psbi_2

f5588973 Location:

Variable Format: character

Notes: UNF:6:TNizrHrrrUj7F0ltEvcxAA==

bldcul

f5588973 Location:

Variable Format: character

Notes: UNF:6:6mqXaBCZINDn0R78RTmGPQ==

weight

f5588973 Location:

Summary Statistics: Valid 903.0; Min. 1.0; Mean 7.6378737541528245; Max. 20.98; StDev 9.416025444084436

Variable Format: numeric

Notes: UNF:6:Y95qTg5oRzxNY27PIzMf4g==

f5588973 Location:

Summary Statistics: Max. 1.0; Mean 0.08527131782945727; Valid 903.0; Min. 0.0; StDev 0.27943978746670267

Variable Format: numeric

Notes: UNF:6:9dZd5qieytp/p8jNgc7gZA==

grp1

f5588973 Location:

Variable Format: character

Notes: UNF:6:7f7vLJtcxRqnmqJEQz28QA==

grp2

f5588973 Location:

Variable Format: character

Notes: UNF:6:psK5uZWthSPk0FHWNTVBRA==

grp3

f5588973 Location:

Variable Format: character

Notes: UNF:6:UR2euS4Qozsoxr6cXSxsAw==

urea_1

f5588973 Location:

Summary Statistics: Min. 27.817524; Max. 39.949856; Mean 36.793497745762714; StDev 2.618101683062508; Valid 118.0

Variable Format: numeric

Notes: UNF:6:LfdKDcZwRXQaInCazFXO4w==

urea_2

f5588973 Location:

Summary Statistics: Min. 27.980122; StDev 2.4924719374591993; Valid 123.0; Mean 36.22326480487805; Max. 39.998234

Variable Format: numeric

Notes: UNF:6:OgUJ7IAyaw4B/rcpItcPMA==

urea_3

f5588973 Location:

Summary Statistics: Mean 32.119888833333334; Max. 37.223999; Valid 18.0; StDev 2.6274633307070205; Min. 26.811001

Variable Format: numeric

Notes: UNF:6:bG2n6yPOdH3erU8bmuivSA==

final_urea40

f5588973 Location:

Variable Format: character

Notes: UNF:6:T9CNUB1JGwB6HVBn0m8egg==

taq

f5588973 Location:

Variable Format: character

Notes: UNF:6:+VVSe1s87CT1DT4Nam8Jug==

bac_1

f5588973 Location:

Variable Format: character

Notes: UNF:6:BwQ/AgN1v3JMe1Y+hpUtPA==

bac_2

f5588973 Location:

Variable Format: character

Notes: UNF:6:JGpIoiHp3UNaVKkS2A+/dg==

vir

f5588973 Location:

Variable Format: character

Notes: UNF:6:D9K2JegXyBgyfhYSb6RqMA==

any

f5588973 Location:

Variable Format: character

Notes: UNF:6:+VVSe1s87CT1DT4Nam8Jug==

good

f5588973 Location:

Variable Format: character

Notes: UNF:6:zLrKvbkce/3t5ZfHBMZ4Ow==

mult

f5588973 Location:

Variable Format: character

Notes: UNF:6:bbj46k8BmxhTUTezf8uObg==

grp4

f5588973 Location:

Variable Format: character

Notes: UNF:6:aeD/bhiPhoseIp3eDvp0wQ==

case_comp

f5588973 Location:

Variable Format: character

Notes: UNF:6:Ieh+/Ol7G0H64qjJqcqzrw==

f5588973 Location:

Variable Format: character

Notes: UNF:6:UDWPGg+I8NiNZkjHIkL/qw==

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