Replication Data for: Tungiasis among children in Kenya is associated with poor nutrition status, absenteeism, poor school performance and high impact on quality of life (doi:10.7910/DVN/JLITGO)

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Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Part 5: Other Study-Related Materials
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Replication Data for: Tungiasis among children in Kenya is associated with poor nutrition status, absenteeism, poor school performance and high impact on quality of life

doi:10.7910/DVN/JLITGO

Harvard Dataverse

2023-11-27

2

Elson, Lynne; Kamau, Christopher; Koech, Sammy; Muthama, Christopher; Gichomba, George; Sinoti, Erastus; Chondo, Elwyn; Mburu,Eliud; Wakio, Miriam; Lore, Jimmy; Maia, Marta; Adetifa, Ifedayo; Orindi, Benedict; Bejon, Philip; Fillinger, Ulrike, 2023, "Replication Data for: Tungiasis among children in Kenya is associated with poor nutrition status, absenteeism, poor school performance and high impact on quality of life", https://doi.org/10.7910/DVN/JLITGO, Harvard Dataverse, V2, UNF:6:5+/V2ehNmV8gtLb1eifJDQ== [fileUNF]

Replication Data for: Tungiasis among children in Kenya is associated with poor nutrition status, absenteeism, poor school performance and high impact on quality of life

doi:10.7910/DVN/JLITGO

Elson, Lynne (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Kamau, Christopher (Department of Health , Muranga)

Koech, Sammy (Department of Health, Kericho)

Muthama, Christopher (Department of Health, Makueni)

Gichomba, George (Department of Health, Nakuru)

Sinoti, Erastus (Department of Health, Samburu)

Chondo, Elwyn (Department of Health, Kilifi)

Mburu,Eliud (Department of Health, Kajiado)

Wakio, Miriam (Department of Health, Taita Taveta)

Lore, Jimmy (Department of Health, Turkana)

Maia, Marta (KEMRI-Wellcome Trust Programme, Kilifi, Kenya)

Adetifa, Ifedayo (KEMRI-Wellcome Trust Programme, Kilifi, Kenya)

Orindi, Benedict (KEMRI-Wellcome Trust Programme, Kilifi, Kenya)

Bejon, Philip (KEMRI-Wellcome Trust Programme, Kilifi, Kenya)

Fillinger, Ulrike (KEMRI-Wellcome Trust Programme, Kilifi, Kenya)

Harvard Dataverse

Mwango, Lillian

Elson, Lynne

2023-11-27

https://doi.org/10.7910/DVN/JLITGO

Medicine, Health and Life Sciences, Tungiasis, NTDs, Quality of Life, Academic achievement

<p>This is a replication dataset for the manuscript titled: "<i><strong>Tungiasis among children in Kenya is associated with poor nutrition status, absenteeism, poor school performance and high impact on quality of life</strong></i>."</p> <p>IMPACT DATASET of 53 variables for 659 primary school pupils collected when interviewing them to assess the impact of tungiasis and data extracted from school attendance and exam records as part of a national survey to determine the national prevalence of the disease. The variables include whether a pupil was infected or not, the severity of disease, their anthropometric measures, how much the fleas affect their quality of life, their school absenteeism and exam scores.</p>

Open Access

Elson, Lynne; Kamau, Christopher; Koech, Sammy; Muthama, Christopher; Gachomba, George; Sinoti, Erastus; Chondo, Elwyn; Mburu, Eliud; Wakio, Miriam; Lore, Jimmy; Maia, Marta F.; Adetifa, Ifedayo; Orindi, Benedict; Bejon, Philip; Fillinger,Ulrike, 2023, "Replication Data for: National prevalence and risk factors for tungiasis in Kenya", https://doi.org/10.7910/DVN/DFSTIZ, Harvard Dataverse, V1

Elson, L., Kamau, C., Koech, S. et al. National prevalence and risk factors for tungiasis in Kenya. Infect Dis Poverty 12, 85 (2023). https://doi.org/10.1186/s40249-023-01131-x

10.1186/s40249-023-01131-x

Elson, L., Kamau, C., Koech, S. et al. National prevalence and risk factors for tungiasis in Kenya. Infect Dis Poverty 12, 85 (2023). https://doi.org/10.1186/s40249-023-01131-x

• Number of cases: 659

• No. of variables per record: 55

• Type of File: text/tab-separated-values

UNF:6:5+/V2ehNmV8gtLb1eifJDQ==

• record_id_anon - record_id_anon
• school_type - school_type
• school_location - school_location
• gender - gender
• grade - grade
• grade_expected_age - grade_expected_age
• age_difference - age_difference
• gradedelay - gradedelay
• sex - sex
• disability - disability
• other_skin_disease - other_skin_disease
• tunga_status - tunga_status
• infection_intensity - infection_intensity
• clinical_score - clinical_score
• diseasegroup - diseasegroup
• height_m - height_m
• weight_kg - weight_kg
• heightage - heightage
• weightage - weightage
• diff_walk_run - diff_walk_run
• conc_itch - conc_itch
• aff_sleep - aff_sleep
• aff_friendship - aff_friendship
• cruel_unkind - cruel_unkind
• feel_sad - feel_sad
• embarrassed - embarrassed
• feel_anger - feel_anger
• TmDLQI - TmDLQI
• TmDQLIgp - TmDQLIgp
• pain - pain
• itching - itching
• days_absent - days_absent
• maths_score - maths_score
• engl_score - engl_score
• science_score - science_score
• maths_perc - maths_perc
• english_perc - english_perc
• science_perc - science_perc
• grade_upper_lower - grade_upper_lower
• SES - SES
• SES_quintiles - SES_quintiles
• adults_living_with - adults_living_with
• caregiver - caregiver
• moth_school - moth_school
• fath_away - fath_away
• moth_away - moth_away
• parent_schmeet - parent_schmeet
• parent_homework - parent_homework
• family_illmonths - family_illmonths
• family_disability - family_disability
• missschool_help - missschool_help
• sleep_parent_hse - sleep_parent_hse
• source_income_job - source_income_job
• room_people - room_people
• mealnumb_yester - mealnumb_yester

f8944350 Location:

Variable Format: character

Notes: UNF:6:Swr1E1T5iZQdDekDEKj3Cg==

f8944350 Location:

Summary Statistics: Min. 1.0; Mean 1.1122913505311078; Valid 659.0; Max. 2.0; StDev 0.31596438965961904;

Variable Format: numeric

Notes: UNF:6:OK5d3OZ41qADDRN2hWx1VQ==

f8944350 Location:

Summary Statistics: Mean 0.8755690440060697; Min. 0.0; Max. 1.0; Valid 659.0; StDev 0.3303232772453662

Variable Format: numeric

Notes: UNF:6:8lk6VgtwStgQUEmk/IJeVQ==

f8944350 Location:

Summary Statistics: Valid 657.0; StDev 1.9497958805843933; Min. 8.0; Max. 14.0; Mean 11.068493150684933

Variable Format: numeric

Notes: UNF:6:pHU/Ougk9nZyEpmQvDRl7w==

f8944350 Location:

Summary Statistics: Min. 1.0; StDev 1.98448412646327; Mean 4.722560975609759; Max. 8.0; Valid 656.0

Variable Format: numeric

Notes: UNF:6:s5BTszHN2FV4rl2GhIQHUw==

f8944350 Location:

Summary Statistics: Min. 6.5; StDev 1.9844841264632702; Max. 13.5; Mean 10.22256097560976; Valid 656.0

Variable Format: numeric

Notes: UNF:6:mQRVzwiQOKzh7Bi90j4gkg==

f8944350 Location:

Summary Statistics: Valid 654.0; Max. 5.5; Min. -5.5; StDev 1.0823389210977217; Mean 0.8409785932721723

Variable Format: numeric

Notes: UNF:6:WACfUOlVF2SVG+QQtkhBFA==

f8944350 Location:

Summary Statistics: Min. 0.0; Valid 659.0; Mean 0.38391502276176087; StDev 0.48670703451742603; Max. 1.0

Variable Format: numeric

Notes: UNF:6:lurSwm6yrfjJ1ODbv2izUw==

f8944350 Location:

Summary Statistics: Mean 1.5098634294385431; Max. 2.0; Valid 659.0; Min. 1.0; StDev 0.5002824243529708

Variable Format: numeric

Notes: UNF:6:iAsa9LuZiUYMMKsfhYWdUg==

f8944350 Location:

Summary Statistics: Mean 0.015174506828528087; Valid 659.0; Min. 0.0; Max. 1.0; StDev 0.1223394980525954;

Variable Format: numeric

Notes: UNF:6:wYWF5Kk4PUnIRZJouq7MlQ==

f8944350 Location:

Summary Statistics: Mean 0.06373292867981785; Min. 0.0; Valid 659.0; Max. 1.0; StDev 0.24446211967625409;

Variable Format: numeric

Notes: UNF:6:lypVPjoiGXLz3Oy/CXuw9w==

f8944350 Location:

Summary Statistics: Mean 0.1229135053110775; Valid 659.0; Max. 1.0; Min. 0.0; StDev 0.3285873005577769

Variable Format: numeric

Notes: UNF:6:nUstY0BA0mFjrEy9FGej9g==

f8944350 Location:

Summary Statistics: Valid 89.0; Mean 13.50561797752809; Min. 0.0; Max. 144.0; StDev 25.6590953196937

Variable Format: numeric

Notes: UNF:6:f/N4fNO6zIjLW/50Sb7juw==

f8944350 Location:

Summary Statistics: StDev 15.31192552526099; Mean 10.225000000000001; Min. 0.0; Max. 74.0; Valid 80.0

Variable Format: numeric

Notes: UNF:6:yMWydDwuozG+7SHKpU8fFA==

f8944350 Location:

Summary Statistics: Valid 81.0; Mean 1.2839506172839505; Min. 1.0; StDev 0.4537225997576758; Max. 2.0

Variable Format: numeric

Notes: UNF:6:6S9xflbhKhRbDUP5DuDL8Q==

f8944350 Location:

Summary Statistics: Mean 1.429877138413686; Min. 0.853; Max. 1.702; Valid 643.0; StDev 0.12196198640405993;

Variable Format: numeric

Notes: UNF:6:ugVCpHZGvWP4iTrI2SMTUQ==

f8944350 Location:

Summary Statistics: StDev 9.552923498034103; Max. 80.0; Mean 32.398755832037324; Min. 12.0; Valid 643.0;

Variable Format: numeric

Notes: UNF:6:mZm4YB4BHPCicWBEtUVNwg==

f8944350 Location:

Summary Statistics: Mean -0.10605557618055661; Min. -4.917295455932617; StDev 1.5570406286747405; Max. 4.957008361816406; Valid 638.0

Variable Format: numeric

Notes: UNF:6:wz0X+ZJd+v9dDwVXK3lepA==

f8944350 Location:

Summary Statistics: Mean -0.8767051256142596; Min. -4.893775463104248; Valid 633.0; StDev 1.3494440264819128; Max. 2.921516895294189;

Variable Format: numeric

Notes: UNF:6:1jaHfhx4R8NY5wBwYqa5zQ==

f8944350 Location:

Summary Statistics: Mean 0.958904109589041; Min. 0.0; Valid 73.0; StDev 1.03331123853238; Max. 3.0

Variable Format: numeric

Notes: UNF:6:UOghYOChw5DddWJErsLN4w==

f8944350 Location:

Summary Statistics: Max. 3.0; Valid 73.0; Min. 0.0; StDev 1.0364366421745272; Mean 1.1506849315068495

Variable Format: numeric

Notes: UNF:6:HAehSxFzLrRwRGdcWa6ZPg==

f8944350 Location:

Summary Statistics: Min. 0.0; StDev 0.9671153107841484; Max. 3.0; Mean 1.1506849315068493; Valid 73.0;

Variable Format: numeric

Notes: UNF:6:2PlZKXE7KVR4Nh7K0x0FUQ==

f8944350 Location:

Summary Statistics: StDev 1.012291281078394; Max. 3.0; Valid 73.0; Min. 0.0; Mean 0.9452054794520549

Variable Format: numeric

Notes: UNF:6:Zn4/dRxXNhA8BvNfNmqIww==

f8944350 Location:

Summary Statistics: Mean 0.7808219178082192; Valid 73.0; StDev 0.9609973890365985; Max. 3.0; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:89dvln3QS5u8gwVOcx9fLw==

f8944350 Location:

Summary Statistics: StDev 1.1175233543369842; Valid 73.0; Min. 0.0; Mean 1.2054794520547947; Max. 3.0

Variable Format: numeric

Notes: UNF:6:+WywYtYpANuEQxSLe6XLog==

f8944350 Location:

Summary Statistics: StDev 1.1317340313908641; Max. 3.0; Min. 0.0; Valid 73.0; Mean 1.4794520547945207

Variable Format: numeric

Notes: UNF:6:5MhdNvew2DVkacqJ7MJVjQ==

f8944350 Location:

Summary Statistics: Mean 1.1232876712328768; StDev 1.104853000270625; Valid 73.0; Min. 0.0; Max. 3.0;

Variable Format: numeric

Notes: UNF:6:wMr/dlGlHawAwV8oQOj5nA==

f8944350 Location:

Summary Statistics: Valid 73.0; StDev 5.3979391749423655; Min. 0.0; Mean 8.794520547945206; Max. 24.0;

Variable Format: numeric

Notes: UNF:6:48rj+HFujza9ZBeNfz1fxw==

f8944350 Location:

Summary Statistics: Max. 5.0; Valid 73.0; Mean 3.0136986301369864; StDev 1.1117197724063421; Min. 1.0

Variable Format: numeric

Notes: UNF:6:CAfNtdxHUccGwdQMF6ByIw==

f8944350 Location:

Summary Statistics: Max. 3.0; Min. 0.0; StDev 1.0959505440195325; Mean 0.9624999999999999; Valid 80.0

Variable Format: numeric

Notes: UNF:6:S4pKxvOdmiF3j8qQQaEdAQ==

f8944350 Location:

Summary Statistics: Max. 3.0; Mean 1.1000000000000003; StDev 1.0977537479504407; Min. 0.0; Valid 80.0

Variable Format: numeric

Notes: UNF:6:wxvMphmdXAB047MsIeNaXA==

f8944350 Location:

Summary Statistics: Valid 624.0; Min. 0.0; Max. 50.0; Mean 2.48557692307692; StDev 4.1423061388756;

Variable Format: numeric

Notes: UNF:6:K7yhEBzRHV939wCEX9HdkQ==

f8944350 Location:

Summary Statistics: Mean 1.6153846153846156; Valid 273.0; StDev 1.022927216617946; Max. 4.0; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:nFK9xLB/B6T53SKpPjpI6g==

f8944350 Location:

Summary Statistics: Max. 4.0; Mean 1.556776556776557; StDev 1.0801857876860725; Min. 0.0; Valid 273.0;

Variable Format: numeric

Notes: UNF:6:MYA1hAEz4F5ZrbRx7Q0ATg==

f8944350 Location:

Summary Statistics: Valid 273.0; StDev 1.0693976298225627; Mean 1.608058608058608; Min. 0.0; Max. 4.0

Variable Format: numeric

Notes: UNF:6:hsga1jImHpHIQpeYk81Uuw==

f8944350 Location:

Summary Statistics: StDev 18.319191084775078; Min. 0.0; Valid 346.0; Mean 45.76878612716763; Max. 96.0;

Variable Format: numeric

Notes: UNF:6:2gwcXiXLMcl364es4UNhYQ==

f8944350 Location:

Summary Statistics: Max. 98.0; Valid 346.0; StDev 17.64684438351479; Min. 0.0; Mean 48.43063583815028

Variable Format: numeric

Notes: UNF:6:SRVy0uT4Bs7zelBe2G9EiQ==

f8944350 Location:

Summary Statistics: StDev 18.572184934800845; Min. 0.0; Mean 50.75072463768115; Valid 345.0; Max. 96.0

Variable Format: numeric

Notes: UNF:6:LeM8e+/LJ5vHOYWJmWhD1g==

f8944350 Location:

Summary Statistics: Valid 619.0; Max. 1.0; StDev 0.4969123731747631; Mean 0.5589660743134082; Min. 0.0

Variable Format: numeric

Notes: UNF:6:fUWA9RzOM6q0Ngrl18WOaA==

f8944350 Location:

Summary Statistics: StDev 0.5222421024615271; Valid 610.0; Max. 2.407955169677734; Mean 1.4809348444469643; Min. 0.4529241323471069

Variable Format: numeric

Notes: UNF:6:WfKZfu9u+DEwPGPq/UxVbw==

f8944350 Location:

Summary Statistics: Mean 3.052459016393443; Max. 5.0; Valid 610.0; Min. 1.0; StDev 1.3886245048820665;

Variable Format: numeric

Notes: UNF:6:1HUMt0ND0Xz5skxolp3+8g==

f8944350 Location:

Summary Statistics: Min. 0.0; Max. 1.0; StDev 0.45043423185632797; Mean 0.28224582701062256; Valid 659.0;

Variable Format: numeric

Notes: UNF:6:0DBZ3bkG8uTGuveqUb+e6Q==

f8944350 Location:

Summary Statistics: Mean 0.23287671232876703; Min. 0.0; Valid 657.0; Max. 1.0; StDev 0.4229863757927029

Variable Format: numeric

Notes: UNF:6:nlQWLJWpVCuEzWbU0pvCWA==

f8944350 Location:

Summary Statistics: Valid 653.0; Mean 2.5436447166921896; StDev 2.961927671301565; Min. 0.0; Max. 9.0;

Variable Format: numeric

Notes: UNF:6:daxIdn+DNciWtx5EzYRStw==

f8944350 Location:

Summary Statistics: StDev 0.4987196037067102; Min. 0.0; Mean 0.45783132530120474; Valid 498.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:xrpVBhBhimWnngF2/qqSZw==

f8944350 Location:

Summary Statistics: Min. 0.0; Mean 0.29674099485420236; StDev 0.4572136737390866; Valid 583.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:byvBjbDCEEYfSEk2mPd7Uw==

f8944350 Location:

Summary Statistics: Valid 656.0; Min. 0.0; StDev 1.0837186440321258; Max. 3.0; Mean 2.0335365853658542;

Variable Format: numeric

Notes: UNF:6:M1YVpKzEviKGlAj0Crbmmw==

f8944350 Location:

Summary Statistics: Mean 1.8525835866261406; StDev 1.1889269735379044; Valid 658.0; Min. 0.0; Max. 3.0

Variable Format: numeric

Notes: UNF:6:GBtrO5KUgzTv9mNb1DUmKQ==

f8944350 Location:

Summary Statistics: Mean 0.16463414634146328; Valid 656.0; StDev 0.3711330129145033; Min. 0.0; Max. 1.0;

Variable Format: numeric

Notes: UNF:6:NvDb/1bn2ha8AV1YuNHakg==

f8944350 Location:

Summary Statistics: StDev 0.23137201541497524; Valid 653.0; Max. 1.0; Mean 0.05666156202143955; Min. 0.0;

Variable Format: numeric

Notes: UNF:6:hbQbGYJYQ6jV4Ghu8HupUA==

f8944350 Location:

Summary Statistics: Min. 0.0; Max. 1.0; Mean 0.15692307692307658; StDev 0.3640083435815582; Valid 650.0

Variable Format: numeric

Notes: UNF:6:84y+S29We8UP9YeIh5q7iA==

f8944350 Location:

Summary Statistics: StDev 0.4021210977898896; Min. 0.0; Mean 0.7975646879756467; Valid 657.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:C1REHLWxf6YBM+u9e/NziQ==

f8944350 Location:

Summary Statistics: Max. 1.0; StDev 0.419612934314576; Mean 0.22761760242792115; Valid 659.0; Min. 0.0

Variable Format: numeric

Notes: UNF:6:kHVGgx5RKbCh9RSMVnMRzQ==

f8944350 Location:

Summary Statistics: Mean 2.333333333333334; Valid 654.0; Min. 0.0; Max. 9.0; StDev 1.5512349145379853

Variable Format: numeric

Notes: UNF:6:CWvaJ3JNxqUdcc/WHkiNtA==

f8944350 Location:

Summary Statistics: Min. 1.0; Max. 3.0; StDev 0.6342567234674422; Valid 641.0; Mean 2.535101404056162

Variable Format: numeric

Notes: UNF:6:ITgHvvjU7laS0vsa1kTDGQ==

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Elson Impact of Tungiasis revized clean v2.pdf

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LynneElson_Tungiasis Impact Data_Readme.txt

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LynneElson_Tungiasis Impact_Codebook.pdf

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