Replication Data for: Comparative performance of WANTAI ELISA for total immunoglobulin to receptor binding protein and an ELISA for IgG to spike protein in detecting SARS-CoV-2 antibodies in Kenyan populations (doi:10.7910/DVN/LRF38U)

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Document Description

Citation

Title:

Replication Data for: Comparative performance of WANTAI ELISA for total immunoglobulin to receptor binding protein and an ELISA for IgG to spike protein in detecting SARS-CoV-2 antibodies in Kenyan populations

Identification Number:

doi:10.7910/DVN/LRF38U

Distributor:

Harvard Dataverse

Date of Distribution:

2022-08-12

Version:

2

Bibliographic Citation:

Nyagwange, James; Kutima, Bernadette; Mwai, Kennedy; Karanja, Henry K.; Gitonga, John N.; Mugo, Daisy; Uyoga, Sophie; Tuju, James; Ochola-Oyier, Lynette I.; Ndungu, Francis; Bejon, Philip; Agweyu, Ambrose; Adetifa, Ifedayo M.O.; Scott, J. Anthony G.; Warimwe, George M., 2022, "Replication Data for: Comparative performance of WANTAI ELISA for total immunoglobulin to receptor binding protein and an ELISA for IgG to spike protein in detecting SARS-CoV-2 antibodies in Kenyan populations", https://doi.org/10.7910/DVN/LRF38U, Harvard Dataverse, V2, UNF:6:Ybl/1uNSwNZHYazGsBZYpQ== [fileUNF]

Study Description

Citation

Title:

Replication Data for: Comparative performance of WANTAI ELISA for total immunoglobulin to receptor binding protein and an ELISA for IgG to spike protein in detecting SARS-CoV-2 antibodies in Kenyan populations

Identification Number:

doi:10.7910/DVN/LRF38U

Authoring Entity:

Nyagwange, James (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Kutima, Bernadette (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Mwai, Kennedy (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Karanja, Henry K. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Gitonga, John N. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Mugo, Daisy (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Uyoga, Sophie (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Tuju, James (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Ochola-Oyier, Lynette I. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Ndungu, Francis (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Bejon, Philip (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Agweyu, Ambrose (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Adetifa, Ifedayo M.O. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Scott, J. Anthony G. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Warimwe, George M. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya)

Distributor:

Harvard Dataverse

Access Authority:

Nyagwange, James

Access Authority:

The Data Governance Committee

Depositor:

Nyagwange, James

Date of Deposit:

2022-08-12

Holdings Information:

https://doi.org/10.7910/DVN/LRF38U

Study Scope

Keywords:

Medicine, Health and Life Sciences, Medicine, Health and Life Sciences

Abstract:

<p>This is a replication dataset for the publication: "<a href="https://doi.org/10.1016/j.jcv.2021.105061">Comparative performance of WANTAI ELISA for total immunoglobulin to receptor binding protein and an ELISA for IgG to spike protein in detecting SARS-CoV-2 antibodies in Kenyan populations</a>."</p> <p>The dataset used in this study included serum samples collected in 2018 in coastal Kenya from adults for investigations of blood transfusion safety or malaria cross-sectional surveys, serum samples collcted in 2020 Kenya-wide from adults investigated for SARS-CoV-2 infection and serum samples colected in 2021 Kenya-wide from adults investigated for blood transfusion. All the serum samples were assayed on an inhouse ELISA (KWTRP) and a commercial ELISA (Wantai) and formed 3 groups (gold standard negatives, gold standard positives and unknowns) which were the basis of comparison for the two ELISAs</p>

Notes:

<p><strong>Data Access: </strong>Restricted</p> <p>Access to these data requires submission of a formal request for consideration by our Data Governance Committee. </p> <strong>How to request</strong> <ol> <li>Download and complete the <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx"><strong>data request form</strong></a></li> <li> Email completed data request form to the Data Governance Committee at <a href="mailto:dgc@kemri-wellcome.org?cc=lmwango@kemri-wellcome.org?Subject=Data%20Access%20Request"><strong>dgc@kemri-wellcome.org</strong></a> </li> </ol> <p><strong>License: </strong><a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a></p>

Methodology and Processing

Sources Statement

Data Access

Citation Requirement:

<p>Publications based on this data collection should acknowledge this source by means of bibliographic citation.</p>

Notes:

<p>This data is licensed under the <a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a> </p>

For access to data and more detailed information beyond the metadata and documentation provided, please send a signed data request form to [<a href="mailto:dgc@kemri-wellcome.org">dgc@kemri-wellcome.org</a> ]. <strong> <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx">Click to download Data Request Form</a></strong>

Other Study Description Materials

Related Studies

Uyoga, Sophie; Adetifa, Ifedayo M.O.; Karanja, Henry K.; Nyagwange, James; Tuju, James; Wanjiku, Perpetual; Aman, Rashid; Mwangangi, Mercy; Amoth, Patrick; Kasera, Kadondi; Ng'ang'a, Wangari; Rombo, Charles; Yegon, Christine K.; Kithi, Khamisi; Odhiambo, Elizabeth; Rotich, Thomas; Orgut, Irene; Kihara, Sammy; Otiende, Mark; Bottomley, Christian; Mupe, Zonia N.; Kagucia, Eunice W.; Gallagher, Katherine; Etyang, Anthony; Voller, Shirine; Gitonga, John; Mugo, Daisy; Agoti, Charles N.; Otieno, Edward; Ndwiga, Leonard; Lambe, Teresa; Wright, Daniel; Barasa, Edwine; Tsofa, Benjamin; Bejon, Philip; Ochola-Oyier, Lynette I.; Agweyu, Ambrose; Scott, J. Anthony G.; Warimwe, George, 2020, "Replication Data for: Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Kenyan blood donors", https://doi.org/10.7910/DVN/RENVC9, Harvard Dataverse, V2

Related Publications

Citation

Identification Number:

10.1016/j.jcv.2021.105061

Bibliographic Citation:

Nyagwange, J., Kutima, B., Mwai, K., Karanja, H.K., Gitonga, J.N., Mugo, D., Uyoga, S., Tuju, J., Ochola-Oyier, L.I., Ndungu, F. and Bejon, P., 2022. Comparative performance of WANTAI ELISA for total immunoglobulin to receptor binding protein and an ELISA for IgG to spike protein in detecting SARS-CoV-2 antibodies in Kenyan populations. Journal of Clinical Virology, 146, p.105061.

Citation

Identification Number:

10.1126/science.abe1916

Bibliographic Citation:

Uyoga, S., Adetifa, I.M., Karanja, H.K., Nyagwange, J., Tuju, J., Wanjiku, P., Aman, R., Mwangangi, M., Amoth, P., Kasera, K. and Ng’ang’a, W., 2021. Seroprevalence of anti–SARS-CoV-2 IgG antibodies in Kenyan blood donors. Science, 371(6524), pp.79-82.

File Description--f6415762

File: preCOVID_KNBTS_2020_2021_cor.tab

  • Number of cases: 467

  • No. of variables per record: 9

  • Type of File: text/tab-separated-values

Notes:

UNF:6:EHB6BJ0EQ4AsGv5QyXrEkg==

File Description--f6415761

File: roc_data.tab

  • Number of cases: 665

  • No. of variables per record: 5

  • Type of File: text/tab-separated-values

Notes:

UNF:6:TGY0DU1tgqUChJ5ukGrW8Q==

File Description--f6415763

File: table3_validation_set.tab

  • Number of cases: 1693

  • No. of variables per record: 4

  • Type of File: text/tab-separated-values

Notes:

UNF:6:RjvT+wBHRymrAvLm02OsTQ==

Other Study-Related Materials

Label:

Fig1_correlation.R

Notes:

type/x-r-syntax

Other Study-Related Materials

Label:

Fig2_ROC.do

Notes:

application/x-stata-syntax

Other Study-Related Materials

Label:

JNyagwange_Wantai_Elisa_Readme.txt

Notes:

text/plain

Other Study-Related Materials

Label:

Table4_wantai_vs_kwtrp.do

Notes:

application/x-stata-syntax