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Part 1: Document Description
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Citation |
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Title: |
SPRED_School: Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya |
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Identification Number: |
doi:10.7910/DVN/O7QZJU |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2022-10-12 |
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Version: |
1 |
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Bibliographic Citation: |
Adema, Irene W.; Kamau, Everlyn; Nyiro, Joyce U.; Otieno, Grieven P.; Murunga, Nickson; Lewa, Clement; Munywoki, Patrick K.; Nokes, D. James, 2022, "SPRED_School: Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya", https://doi.org/10.7910/DVN/O7QZJU, Harvard Dataverse, V1, UNF:6:+DsByLln+vv5oZjY7QtZZA== [fileUNF] |
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Citation |
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Title: |
SPRED_School: Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya |
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Identification Number: |
doi:10.7910/DVN/O7QZJU |
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Authoring Entity: |
Adema, Irene W. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Kamau, Everlyn (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Nyiro, Joyce U. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Otieno, Grieven P. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Murunga, Nickson (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Lewa, Clement (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Munywoki, Patrick K. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Nokes, D. James (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
Nokes, D. James |
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Depositor: |
Adema, Irene W. |
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Date of Deposit: |
2022-10-11 |
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Holdings Information: |
https://doi.org/10.7910/DVN/O7QZJU |
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Study Scope |
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Keywords: |
Medicine, Health and Life Sciences, Medicine, Health and Life Sciences, Respiratory viruses, school surveillance, real-time PCR, school children, nasopharyngeal samples, coastal Kenya |
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Abstract: |
<p>This study is part of a larger project titled SPReD (Studies of the Pathways of transmission of Respiratory virus Disease; http://virec-group.org/research/) which aims to advance understanding of the nature of the spread of respiratory viruses. The study was conducted as one-year surveillance of respiratory viruses in a rural primary school in Kilifi county, coastal Kenya with the main aim of characterizing respiratory virus infection in the school setting and defining the role of school-going children in the transmission of these viruses in the general community.</p> <p>The main dataset contains 80 variables and 3441 observations. These data include records of anthropometric measures, acute respiratory infection (ARI) symptoms, and laboratory test results from nasal samples obtained from symptomatic school children every week over one school year. Each student's anthropometric measures, including age, grade, weight, height, mid-upper arm circumference, temperature, and respiratory rate, were recorded every week from a random sample of symptomatic students in each grade. Acute respiratory infection symptoms were also recorded at this time. Nasal samples were screened for 15 virus targets using real-time PCR. Samples were considered positive for a specific target if the ct value was <35. The dataset is used to describe the types of respiratory viruses circulating among school-going children.</p> |
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Notes: |
<p><strong>Data Access: </strong>Restricted</p> <p>Access to these data requires submission of a formal request for consideration by our Data Governance Committee. </p> <strong>How to request</strong> <ol> <li>Download and complete the <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx"><strong>data request form</strong></a></li> <li> Email completed data request form to the Data Governance Committee at <a href="mailto:dgc@kemri-wellcome.org?cc=lmwango@kemri-wellcome.org?Subject=Data%20Access%20Request"><strong>dgc@kemri-wellcome.org</strong></a> </li> </ol> <p><strong>License: </strong><a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a></p> |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Citation Requirement: |
<p>Publications based on this data collection should acknowledge this source by means of bibliographic citation.</p> |
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Notes: |
<p>This data is licensed under the <a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a> </p> |
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For access to data and more detailed information beyond the metadata and documentation provided, there is a process of managed access requiring submission of a request form for consideration by our Data Governance Committee [<a href="mailto:dgc@kemri-wellcome.org">dgc@kemri-wellcome.org</a> ]. <strong> <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx">Click to download Data Request Form</a></strong> |
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Other Study Description Materials |
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Related Publications |
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Citation |
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Identification Number: |
10.12688/wellcomeopenres.15703.1 |
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Bibliographic Citation: |
Adema, I.W., Kamau, E., Nyiro, J.U., Otieno, G.P., Lewa, C., Munywoki, P.K. and Nokes, D.J., 2020. Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya. Wellcome Open Research, 5. |
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File Description--f6565241 |
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File: SPReD_Schools_Surv_Anthtopometrics_PCR_results_de_identified_v2-1.tab |
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Notes: |
UNF:6:7PleBvD1oWzX6U5QQVlCAg== |
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File Description--f6565242 |
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File: SPReD_Schools_Surv_Anthtopometrics_PCR_results_de_identified_v2.tab |
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Notes: |
UNF:6:5IhrEq91afzT9b3W8IyEBA== |
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Label: |
Spred_schools_DATASET_Codebook_V2.pdf |
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Notes: |
application/pdf |
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Label: |
Spred_Schools ReadMe.txt |
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Notes: |
text/plain |