5X8M, anti-PD-L1 antibody, Durvalumab (311.5K, 38.5C, 500 ns), random seed #2: RMSD, RMSF, Rg, SASA (doi:10.7910/DVN/SVCHEN)

View:

Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Part 5: Other Study-Related Materials
Entire Codebook

Document Description

Citation

Title:

5X8M, anti-PD-L1 antibody, Durvalumab (311.5K, 38.5C, 500 ns), random seed #2: RMSD, RMSF, Rg, SASA

Identification Number:

doi:10.7910/DVN/SVCHEN

Distributor:

Harvard Dataverse

Date of Distribution:

2025-03-11

Version:

1

Bibliographic Citation:

PCD, Thermo, 2025, "5X8M, anti-PD-L1 antibody, Durvalumab (311.5K, 38.5C, 500 ns), random seed #2: RMSD, RMSF, Rg, SASA", https://doi.org/10.7910/DVN/SVCHEN, Harvard Dataverse, V1, UNF:6:UXzeDvmZLtFRjkvnPAL1Rg== [fileUNF]

Study Description

Citation

Title:

5X8M, anti-PD-L1 antibody, Durvalumab (311.5K, 38.5C, 500 ns), random seed #2: RMSD, RMSF, Rg, SASA

Identification Number:

doi:10.7910/DVN/SVCHEN

Authoring Entity:

PCD, Thermo (Chonnam National University)

Distributor:

Harvard Dataverse

Access Authority:

PCD, Thermo

Depositor:

PCD, Thermo

Date of Deposit:

2025-03-11

Holdings Information:

https://doi.org/10.7910/DVN/SVCHEN

Study Scope

Keywords:

Computer and Information Science, PD-L1, durvalumab

Abstract:

5X8M, anti-PD-L1 antibody, Durvalumab (311.5K, 38.5C, 500 ns), random seed #2: RMSD, RMSF, Rg, SASA. PDBs obtained every 50 ns.

Methodology and Processing

Sources Statement

Data Access

Other Study Description Materials

File Description--f10981600

File: 5x8m-ab-rs2-311.5k-res-sasa.tab

  • Number of cases: 450

  • No. of variables per record: 3

  • Type of File: text/tab-separated-values

Notes:

UNF:6:XSMbi+vhzUyGhH03a3FhIw==

File Description--f10981606

File: 5x8m-ab-rs2-311.5k-rg.tab

  • Number of cases: 100001

  • No. of variables per record: 5

  • Type of File: text/tab-separated-values

Notes:

UNF:6:zRQMBIwKMTaoblC4MuIl0Q==

File Description--f10981602

File: 5x8m-ab-rs2-311.5k-rmsd.tab

  • Number of cases: 100001

  • No. of variables per record: 2

  • Type of File: text/tab-separated-values

Notes:

UNF:6:bcT+O4Np9mb56KC9iIHQWA==

File Description--f10981604

File: 5x8m-ab-rs2-311.5k-rmsf.tab

  • Number of cases: 449

  • No. of variables per record: 2

  • Type of File: text/tab-separated-values

Notes:

UNF:6:5AHGQnCG2orWjUrxqWeBoA==

File Description--f10981593

File: 5x8m-ab-rs2-311.5k-sasa.tab

  • Number of cases: 100001

  • No. of variables per record: 2

  • Type of File: text/tab-separated-values

Notes:

UNF:6:m2FTMGq/3a5UatsTC9wCFg==

Variable Description

List of Variables:

Variables

Time (ps)

f10981600 Location:

Summary Statistics: Mean 348.5; Max. 573.0; Valid 450.0; StDev 130.0480680363995; Min. 124.0

Variable Format: numeric

Notes: UNF:6:x2efBYXHtjW5eYdkYZ04Bg==

Average (nm\S2\N)

f10981600 Location:

Summary Statistics: Max. 1.979; Min. 0.0; Valid 450.0; StDev 0.4450363690528645; Mean 0.4892355555555556

Variable Format: numeric

Notes: UNF:6:PyKwHpCpnPhrJOdfH/0+lQ==

Standard deviation (nm\S2\N)

f10981600 Location:

Summary Statistics: Mean 0.11720666666666667; Valid 450.0; Min. 0.0; StDev 0.08646896246592292; Max. 0.478;

Variable Format: numeric

Notes: UNF:6:735cJQbDu+3U+vR/w73TvQ==

Time (ps)

f10981606 Location:

Summary Statistics: Min. 0.0; Mean 500000.0; Max. 1000000.0; Valid 100001.0; StDev 288679.46471822343

Variable Format: numeric

Notes: UNF:6:XhQbY5+wyhQ+x6yY6G2Stw==

Rg

f10981606 Location:

Summary Statistics: Mean 2.5681410990890092; Max. 2.68966; StDev 0.028702790751545054; Min. 2.46475; Valid 100001.0;

Variable Format: numeric

Notes: UNF:6:SCdv7mOBdRIbvla67veFRg==

Rg\sX\N

f10981606 Location:

Summary Statistics: Min. 1.46247; Valid 100001.0; Mean 2.1390517884821145; StDev 0.2431589444100995; Max. 2.53701

Variable Format: numeric

Notes: UNF:6:rcu8BID/8UFBmI6kcmmAdQ==

Rg\sY\N

f10981606 Location:

Summary Statistics: StDev 0.27060040247642053; Mean 2.0460776040239597; Valid 100001.0; Max. 2.50035; Min. 1.44703

Variable Format: numeric

Notes: UNF:6:RDSmPCSmQTl8pFivM9EKcw==

Rg\sZ\N

f10981606 Location:

Summary Statistics: StDev 0.2694676713724539; Mean 2.055579621603784; Valid 100001.0; Min. 1.44427; Max. 2.50472;

Variable Format: numeric

Notes: UNF:6:1R3HvwNAT/AZWcXjH1xL3g==

Time (ps)

f10981602 Location:

Summary Statistics: Valid 100001.0; Min. 0.0; StDev 288.6794784181928; Max. 1000.000061; Mean 500.00002373376685

Variable Format: numeric

Notes: UNF:6:mKlLOKz1eFrxSQoWBdYGWw==

fter lsq fit to Protein

f10981602 Location:

Summary Statistics: Valid 100001.0; Mean 0.3468639374166258; StDev 0.05934009367783951; Min. 5.071E-4; Max. 0.6043913;

Variable Format: numeric

Notes: UNF:6:vcD8nxo1Y+5G3oUYIIImvw==

124

f10981604 Location:

Summary Statistics: Min. 125.0; Mean 349.0; StDev 129.7593927236098; Valid 449.0; Max. 573.0

Variable Format: numeric

Notes: UNF:6:u3ROuXzVeX9ykyKc0jGfAA==

0.6055

f10981604 Location:

Summary Statistics: StDev 0.1504110907436031; Max. 1.5123; Min. 0.0808; Valid 449.0; Mean 0.21694097995545655

Variable Format: numeric

Notes: UNF:6:sO4a830b6ExsQCE032JMTQ==

Time (ps)

f10981593 Location:

Summary Statistics: StDev 288679.46471822343; Valid 100001.0; Min. 0.0; Max. 1000000.0; Mean 500000.0

Variable Format: numeric

Notes: UNF:6:XhQbY5+wyhQ+x6yY6G2Stw==

Total

f10981593 Location:

Summary Statistics: Mean 220.15965517344827; Valid 100001.0; StDev 3.6380615663074636; Min. 207.405; Max. 236.512

Variable Format: numeric

Notes: UNF:6:wjYYl5xINxOX4DKVA5r8Yw==

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-0ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-1000ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-100ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-200ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-300ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-400ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-500ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-600ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-700ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-800ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-900ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-res-sasa.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-rg.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-rmsd.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-rmsf.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-311.5k-sasa.xvg

Notes:

application/octet-stream