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Part 1: Document Description
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Citation |
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Title: |
An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams |
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Identification Number: |
doi:10.7910/DVN/WPZHQR |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2020-06-24 |
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Version: |
2 |
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Bibliographic Citation: |
Mohammed, Khadija Said; de Laurent, Zaydah R.; Omuoyo, Donwilliams O.; Lewa, Clement; Gicheru, Elijah; Cheruiyot, Robinson; Bartilol, Brian; Mutua, Shadrack; Musyoki, Jennifer; Gumba, Horace; Mwacharo, Jedidah; Riako, Debra; Mwangi, Shaban; Gichuki, Bonface M.; Nyamako, Lydia; Karani, Angela; Karanja, Henry; Mugo, Daisy; Gitonga, John N.; Njuguna, Susan; Gumbi, Wilson; Tawa, Brian; Tendwa, Metrine; Cheruiyot, Wesley; Sein, Yiakon; Nyambu, John K.; Patta, Shem O.; Thani, Thani Suleiman; Maitha, Eric K.; Kitole, Benson; Mwakinangu, Mohamed S.; Muslih, Barke S.; Otieno, John Ochieng; Nyiro, Joyce U.; Kiyuka, Patience; Ndwiga, Leonard M.; Wamae, Kevin; Kimani, Domtila; Makale, Johnstone; Morobe, John Mwita; Osoti, Victor; Lambisia, Arnold W.; Odundo, Calleb; Mwarumba, Salim; Mutunga, Martin; Bejon, Philip; Tsofa, Benjamin; Agoti, Charles N.; Ochola-Oyier, Lynette Isabella, 2020, "An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams", https://doi.org/10.7910/DVN/WPZHQR, Harvard Dataverse, V2 |
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Citation |
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Title: |
An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams |
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Identification Number: |
doi:10.7910/DVN/WPZHQR |
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Authoring Entity: |
Mohammed, Khadija Said (KEMRI-Wellcome Trust Research Programme) |
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de Laurent, Zaydah R. (KEMRI-Wellcome Trust Research Programme) |
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Omuoyo, Donwilliams O. (KEMRI-Wellcome Trust Research Programme) |
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Lewa, Clement (KEMRI-Wellcome Trust Research Programme) |
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Gicheru, Elijah (KEMRI-Wellcome Trust Research Programme) |
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Cheruiyot, Robinson (KEMRI-Wellcome Trust Research Programme) |
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Bartilol, Brian (KEMRI-Wellcome Trust Research Programme) |
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Mutua, Shadrack (KEMRI-Wellcome Trust Research Programme) |
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Musyoki, Jennifer (KEMRI-Wellcome Trust Research Programme) |
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Gumba, Horace (KEMRI-Wellcome Trust Research Programme) |
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Mwacharo, Jedidah (KEMRI-Wellcome Trust Research Programme) |
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Riako, Debra (KEMRI-Wellcome Trust Research Programme) |
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Mwangi, Shaban (KEMRI-Wellcome Trust Research Programme) |
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Gichuki, Bonface M. (KEMRI-Wellcome Trust Research Programme) |
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Nyamako, Lydia (KEMRI-Wellcome Trust Research Programme) |
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Karani, Angela (KEMRI-Wellcome Trust Research Programme) |
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Karanja, Henry (KEMRI-Wellcome Trust Research Programme) |
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Mugo, Daisy (KEMRI-Wellcome Trust Research Programme) |
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Gitonga, John N. (KEMRI-Wellcome Trust Research Programme) |
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Njuguna, Susan (KEMRI-Wellcome Trust Research Programme) |
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Gumbi, Wilson (KEMRI-Wellcome Trust Research Programme) |
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Tawa, Brian (KEMRI-Wellcome Trust Research Programme) |
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Tendwa, Metrine (KEMRI-Wellcome Trust Research Programme) |
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Cheruiyot, Wesley (KEMRI-Wellcome Trust Research Programme) |
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Sein, Yiakon (KEMRI-Wellcome Trust Research Programme) |
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Nyambu, John K. (Department of Health Services Taita-Taveta County) |
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Patta, Shem O. (Department of Health Services, Mombasa County) |
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Thani, Thani Suleiman (Department of Health Services, Mombasa County) |
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Maitha, Eric K. (Kilifi County Hospital) |
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Kitole, Benson (Kilifi County Hospital) |
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Mwakinangu, Mohamed S. (Department of Health Services, Kwale County) |
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Muslih, Barke S. (Hola Referral Hospital, Tana River County) |
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Otieno, John Ochieng (King Fahd Lamu County Referral Hospital) |
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Nyiro, Joyce U. (KEMRI-Wellcome Trust Research Programme) |
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Kiyuka, Patience (KEMRI-Wellcome Trust Research Programme) |
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Ndwiga, Leonard M. (KEMRI-Wellcome Trust Research Programme) |
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Wamae, Kevin (KEMRI-Wellcome Trust Research Programme) |
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Kimani, Domtila (KEMRI-Wellcome Trust Research Programme) |
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Makale, Johnstone (KEMRI-Wellcome Trust Research Programme) |
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Morobe, John Mwita (KEMRI-Wellcome Trust Research Programme) |
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Osoti, Victor (KEMRI-Wellcome Trust Research Programme) |
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Lambisia, Arnold W. (KEMRI-Wellcome Trust Research Programme) |
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Odundo, Calleb (KEMRI-Wellcome Trust Research Programme) |
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Mwarumba, Salim (KEMRI-Wellcome Trust Research Programme) |
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Mutunga, Martin (KEMRI-Wellcome Trust Research Programme) |
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Bejon, Philip (KEMRI-Wellcome Trust Research Programme) |
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Tsofa, Benjamin (KEMRI-Wellcome Trust Research Programme) |
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Agoti, Charles N. (KEMRI-Wellcome Trust Research Programme) |
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Ochola-Oyier, Lynette Isabella (KEMRI-Wellcome Trust Research Programme) |
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Grant Number: |
220985 |
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Grant Number: |
102975 |
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Grant Number: |
203077 |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
Ochola-Oyier, Lynette Isabella |
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Depositor: |
Wamae, Kevin |
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Date of Deposit: |
2020-06-24 |
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Holdings Information: |
https://doi.org/10.7910/DVN/WPZHQR |
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Study Scope |
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Keywords: |
Medicine, Health and Life Sciences, COVID-19, SARS-CoV-2, coronavirus, RT-PCR, diagnosis, optimization |
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Topic Classification: |
SARS-CoV-2, COVID-19 |
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Abstract: |
qRT-PCR replication dataset generated from the optimisation of four assays for SARS-CoV-2 diagnosis |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Notes: |
<a href="http://creativecommons.org/publicdomain/zero/1.0">CC0 1.0</a> |
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Other Study Description Materials |
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Related Publications |
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Citation |
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Title: |
Said K, de Laurent ZR, Omuoyo DO et al. An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams [version 1; peer review: awaiting peer review]. Wellcome Open Res 2020, 5:162 (https://doi.org/10.12688/wellcomeopenres.16063.1) |
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Identification Number: |
10.12688/wellcomeopenres.16063.1 |
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Bibliographic Citation: |
Said K, de Laurent ZR, Omuoyo DO et al. An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams [version 1; peer review: awaiting peer review]. Wellcome Open Res 2020, 5:162 (https://doi.org/10.12688/wellcomeopenres.16063.1) |
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Label: |
Data File 1 revised - Berlin E (FastVirus).xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 2 revised - Berlin N (FastVirus).xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 3 revised - EVA-g E P&P mix (FastVirus 2).xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 4 revised - EVA-g RdRp (FastVirus).xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 5 revised - DAAN N.xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 6 revised - DAAN ORF1ab.xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 7 revised - BGI ORF1ab.xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 8 revised - BGI ORF1ab Enzyme_alterations.xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |
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Label: |
Data File 9 revised - Berlin RdRp (Fast Virus).xlsx |
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Notes: |
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet |