5X8M, anti-PD-L1 antibody, Durvalumab (298K, 25C, 500 ns), random seed #2 (doi:10.7910/DVN/XD8JFK)

View:

Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Part 5: Other Study-Related Materials
Entire Codebook

Document Description

Citation

Title:

5X8M, anti-PD-L1 antibody, Durvalumab (298K, 25C, 500 ns), random seed #2

Identification Number:

doi:10.7910/DVN/XD8JFK

Distributor:

Harvard Dataverse

Date of Distribution:

2025-03-11

Version:

1

Bibliographic Citation:

PCD, Thermo, 2025, "5X8M, anti-PD-L1 antibody, Durvalumab (298K, 25C, 500 ns), random seed #2", https://doi.org/10.7910/DVN/XD8JFK, Harvard Dataverse, V1, UNF:6:zIAV29d0CuEPNZoFp9EZrQ== [fileUNF]

Study Description

Citation

Title:

5X8M, anti-PD-L1 antibody, Durvalumab (298K, 25C, 500 ns), random seed #2

Identification Number:

doi:10.7910/DVN/XD8JFK

Authoring Entity:

PCD, Thermo (Chonnam National University)

Distributor:

Harvard Dataverse

Access Authority:

PCD, Thermo

Depositor:

PCD, Thermo

Date of Deposit:

2025-03-11

Holdings Information:

https://doi.org/10.7910/DVN/XD8JFK

Study Scope

Keywords:

Computer and Information Science, PD-L1, durvalumab

Abstract:

5X8M, anti-PD-L1 antibody, Durvalumab (298K, 25C, 500 ns), random seed #2.

Methodology and Processing

Sources Statement

Data Access

Other Study Description Materials

File Description--f10981327

File: 5x8m-ab-rs2-298k-res-sasa.tab

  • Number of cases: 450

  • No. of variables per record: 3

  • Type of File: text/tab-separated-values

Notes:

UNF:6://SgR1/MQYPrpxOTkDnPwQ==

File Description--f10981346

File: 5x8m-ab-rs2-298k-rg.tab

  • Number of cases: 100001

  • No. of variables per record: 5

  • Type of File: text/tab-separated-values

Notes:

UNF:6:f2luotPZrB+G6MuYTf2DyA==

File Description--f10981325

File: 5x8m-ab-rs2-298k-rmsd.tab

  • Number of cases: 100001

  • No. of variables per record: 2

  • Type of File: text/tab-separated-values

Notes:

UNF:6:45bUFOMYAj1qVtGrXh8zUw==

File Description--f10981309

File: 5x8m-ab-rs2-298k-rmsf.tab

  • Number of cases: 449

  • No. of variables per record: 2

  • Type of File: text/tab-separated-values

Notes:

UNF:6:KZMZqD5ocIpVSIjjrnd5Rw==

File Description--f10981321

File: 5x8m-ab-rs2-298k-sasa.tab

  • Number of cases: 100001

  • No. of variables per record: 2

  • Type of File: text/tab-separated-values

Notes:

UNF:6:GQjUxsoCRqWld8moPsLjkQ==

Variable Description

List of Variables:

Variables

Time (ps)

f10981327 Location:

Summary Statistics: Valid 450.0; Mean 348.5; StDev 130.0480680363995; Max. 573.0; Min. 124.0;

Variable Format: numeric

Notes: UNF:6:x2efBYXHtjW5eYdkYZ04Bg==

Average (nm\S2\N)

f10981327 Location:

Summary Statistics: Valid 450.0; Mean 0.4824644444444445; Max. 2.22; StDev 0.4530242399526289; Min. 0.0

Variable Format: numeric

Notes: UNF:6:XNUBCY/9PhuDHsygMovonQ==

Standard deviation (nm\S2\N)

f10981327 Location:

Summary Statistics: Mean 0.10718222222222222; Min. 0.0; Max. 0.484; StDev 0.07773696523163798; Valid 450.0

Variable Format: numeric

Notes: UNF:6:Zo3aZPt6zFq06lTU43Q/jg==

Time (ps)

f10981346 Location:

Summary Statistics: StDev 288679.46471822343; Mean 500000.0; Valid 100001.0; Min. 0.0; Max. 1000000.0;

Variable Format: numeric

Notes: UNF:6:XhQbY5+wyhQ+x6yY6G2Stw==

Rg

f10981346 Location:

Summary Statistics: Min. 2.44763; Max. 2.68925; StDev 0.027947534343288925; Valid 100001.0; Mean 2.545841358186418;

Variable Format: numeric

Notes: UNF:6:fuO79hkG3A8zZ1ep0uSSVw==

Rg\sX\N

f10981346 Location:

Summary Statistics: Mean 2.0095013479865202; Max. 2.44504; Valid 100001.0; StDev 0.2679891176529601; Min. 1.47787

Variable Format: numeric

Notes: UNF:6:oHAz4Yc1L1wbxozAipGGAQ==

Rg\sY\N

f10981346 Location:

Summary Statistics: Mean 2.111470591794082; Min. 1.46976; Valid 100001.0; StDev 0.20929378779993396; Max. 2.44892

Variable Format: numeric

Notes: UNF:6:0Ft612GqwXiwCvgyjIQVKA==

Rg\sZ\N

f10981346 Location:

Summary Statistics: Max. 2.4953; StDev 0.22589514910033662; Min. 1.49526; Valid 100001.0; Mean 2.0739156303436967;

Variable Format: numeric

Notes: UNF:6:XldiOL9Fs+DbkoK5rCdsiQ==

Time (ps)

f10981325 Location:

Summary Statistics: StDev 288.6794784181928; Mean 500.00002373376685; Max. 1000.000061; Min. 0.0; Valid 100001.0;

Variable Format: numeric

Notes: UNF:6:mKlLOKz1eFrxSQoWBdYGWw==

fter lsq fit to Protein

f10981325 Location:

Summary Statistics: Min. 5.01E-4; Valid 100001.0; Max. 0.519461; StDev 0.052555647502371475; Mean 0.2615892321756783

Variable Format: numeric

Notes: UNF:6:0wWmFWbD6PuFKrKeIxWnQA==

124

f10981309 Location:

Summary Statistics: Min. 125.0; Mean 349.0; Max. 573.0; StDev 129.7593927236098; Valid 449.0;

Variable Format: numeric

Notes: UNF:6:u3ROuXzVeX9ykyKc0jGfAA==

0.4188

f10981309 Location:

Summary Statistics: Min. 0.0738; Mean 0.1859347438752784; StDev 0.11454870219298517; Max. 1.3027; Valid 449.0

Variable Format: numeric

Notes: UNF:6:+LmlHX30DnojErnu2TpHOg==

Time (ps)

f10981321 Location:

Summary Statistics: Max. 1000000.0; Min. 0.0; Mean 500000.0; Valid 100001.0; StDev 288679.46471822343;

Variable Format: numeric

Notes: UNF:6:XhQbY5+wyhQ+x6yY6G2Stw==

Total

f10981321 Location:

Summary Statistics: Valid 100001.0; StDev 3.1176962179762375; Max. 232.546; Mean 217.11487844121558; Min. 205.174

Variable Format: numeric

Notes: UNF:6:f0e/1quyqWnCIjP8KUhWCw==

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-0ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-1000ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-100ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-200ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-300ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-400ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-500ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-600ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-700ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-800ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-900ns.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-res-sasa.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-rg.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-rmsd.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-rmsf.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab-rs2-298k-sasa.xvg

Notes:

application/octet-stream

Other Study-Related Materials

Label:

5x8m-ab.pdb

Notes:

application/vnd.palm

Other Study-Related Materials

Label:

complex.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

dynamic-nopbc.xtc

Notes:

application/octet-stream

Other Study-Related Materials

Label:

em.edr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

em.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

em.log

Notes:

text/plain

Other Study-Related Materials

Label:

em.mdp

Notes:

application/octet-stream

Other Study-Related Materials

Label:

em.tpr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

em.trr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

ie.mdp

Notes:

application/octet-stream

Other Study-Related Materials

Label:

ions.mdp

Notes:

application/octet-stream

Other Study-Related Materials

Label:

ions.tpr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

md.mdp

Notes:

application/octet-stream

Other Study-Related Materials

Label:

mdout.mdp

Notes:

application/octet-stream

Other Study-Related Materials

Label:

md_0_10.cpt

Notes:

application/mac-compactpro

Other Study-Related Materials

Label:

md_0_10.edr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

md_0_10.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

md_0_10.log

Notes:

text/plain

Other Study-Related Materials

Label:

md_0_10.tpr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

md_0_10_prev.cpt

Notes:

application/mac-compactpro

Other Study-Related Materials

Label:

newbox.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

npt.cpt

Notes:

application/mac-compactpro

Other Study-Related Materials

Label:

npt.edr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

npt.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

npt.log

Notes:

text/plain

Other Study-Related Materials

Label:

npt.mdp

Notes:

application/octet-stream

Other Study-Related Materials

Label:

npt.tpr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

npt.trr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

nvt.cpt

Notes:

application/mac-compactpro

Other Study-Related Materials

Label:

nvt.edr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

nvt.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

nvt.log

Notes:

text/plain

Other Study-Related Materials

Label:

nvt.mdp

Notes:

application/octet-stream

Other Study-Related Materials

Label:

nvt.tpr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

nvt.trr

Notes:

application/octet-stream

Other Study-Related Materials

Label:

posre_Protein_chain_B.itp

Notes:

application/vnd.shana.informed.formtemplate

Other Study-Related Materials

Label:

posre_Protein_chain_C.itp

Notes:

application/vnd.shana.informed.formtemplate

Other Study-Related Materials

Label:

solv.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

solv_ions.gro

Notes:

application/octet-stream

Other Study-Related Materials

Label:

topol.top

Notes:

application/octet-stream

Other Study-Related Materials

Label:

topol.top.1

Notes:

application/octet-stream

Other Study-Related Materials

Label:

topol.top.2

Notes:

application/octet-stream

Other Study-Related Materials

Label:

topol_Protein_chain_B.itp

Notes:

application/vnd.shana.informed.formtemplate

Other Study-Related Materials

Label:

topol_Protein_chain_C.itp

Notes:

application/vnd.shana.informed.formtemplate

Other Study-Related Materials

Label:

xvg2csv.py

Notes:

text/x-python