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Part 1: Document Description
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Citation |
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Title: |
Replication Data for: Malaria infection and severe disease risks in Africa |
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Identification Number: |
doi:10.7910/DVN/XGDB3K |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2021-05-18 |
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Version: |
2 |
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Bibliographic Citation: |
Paton, Robert S.; Kamau, Alice; Akech, Samuel; Agweyu, Ambrose; Ogero, Morris; Mwandawiro, Charles; Mturi, Neema; Mohammed, Shebe; Mpimbaza, Arthur; Kariuki, Simon; Otieno, Nancy A.; Nyawanda, Bryan O.; Mohamed, Amina F.; Mtove, George; Reyburn, Hugh; Gupta, Sunetra; Bejon, Philip; Lourenco, Jose; Snow, Robert W., 2021, "Replication Data for: Malaria infection and severe disease risks in Africa", https://doi.org/10.7910/DVN/XGDB3K, Harvard Dataverse, V2, UNF:6:799jIicR8vk+tQdcAXzITQ== [fileUNF] |
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Citation |
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Title: |
Replication Data for: Malaria infection and severe disease risks in Africa |
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Identification Number: |
doi:10.7910/DVN/XGDB3K |
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Authoring Entity: |
Paton, Robert S. (Department of Zoology, University of Oxford, UK) |
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Kamau, Alice (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; Centre for Tropical Medicine and Global Health, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK) |
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Akech, Samuel (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Agweyu, Ambrose (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Ogero, Morris (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Mwandawiro, Charles (Eastern and Southern Africa Centre of International Parasite Control, Kenya Medical Research Institute (KEMRI), Nairobi, Kenya) |
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Mturi, Neema (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Mohammed, Shebe (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya) |
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Mpimbaza, Arthur (Child Health and Development Centre, Makerere University, College of Health Sciences, Kampala, Uganda) |
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Kariuki, Simon (Kenya Medical Research Institute - Centre for Global Health Research, Kisumu, Kenya) |
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Otieno, Nancy A. (Kenya Medical Research Institute - Centre for Global Health Research, Kisumu, Kenya) |
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Nyawanda, Bryan O. (Kenya Medical Research Institute - Centre for Global Health Research, Kisumu, Kenya) |
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Mohamed, Amina F. (Kilimanjaro Christian Medical Centre/Joint Malaria Programme, Moshi, Tanzania (AFM); London School of Hygiene and Tropical Medicine, London, UK (HR, AFM)) |
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Mtove, George (National Institute for Medical Research, Amani Research Centre, Muheza, Tanzania (GM)) |
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Reyburn, Hugh (London School of Hygiene and Tropical Medicine, London, UK (HR, AFM)) |
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Gupta, Sunetra (Department of Zoology, University of Oxford, UK) |
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Bejon, Philip (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; Centre for Tropical Medicine and Global Health, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK) |
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Lourenco, Jose (Department of Zoology, University of Oxford, UK) |
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Snow, Robert W. (KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; Centre for Tropical Medicine and Global Health, Nuffield Department of Clinical Medicine, University of Oxford, Oxford, UK) |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
Kamau, Alice |
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Depositor: |
Kamau, Alice |
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Date of Deposit: |
2021-05-18 |
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Holdings Information: |
https://doi.org/10.7910/DVN/XGDB3K |
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Study Scope |
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Keywords: |
Medicine, Health and Life Sciences, Malaria, Plasmodium falciparum, severe malaria, anaemia, cerebral malaria, Africa |
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Abstract: |
<p>This is a replication dataset for the manuscript: "<a href="">Malaria infection and severe disease risks in Africa</a>."</p> <p>These data were obtained from 13 hospitals in East Africa that had a continuous paediatric ward surveillance established for the purposes of monitoring acute febrile illness aetiology, disease burden epidemiology or research settings for improvements in hospital case-management. Each site used malaria diagnostics on all febrile presentations, an electronic medical record form that recorded standardised features of severe malaria and documented residential addresses on all admissions. The data includes the signs and symptoms of the three common paediatric severe malaria phenotypes (severe malaria anaemia, respiratory distress and cerebral malaria) including alternative definitions of these severe pathologies. </p> |
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Notes: |
<strong>License</strong> <p>This data is licensed under the <a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a> </p> <strong>Data Availability</strong> <p>These data are available through a formal requesting process to the KEMRI Institutional Data Access/Ethics Committee. </p> <strong>How to request</strong> <ol> <li>Download and complete the <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx"><strong>data request form</strong></a></li> <li> Email completed data request form to the Data Governance Committee at <a href="mailto:dgc@kemri-wellcome.org?cc=lmwango@kemri-wellcome.org?Subject=Data%20Access%20Request"><strong>dgc@kemri-wellcome.org</strong></a> </li> </ol> |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Location: |
Restricted access. This is a secondary data analysis from existing data and open access to these data is not permitted by the original data producers. Correspondence and requests for materials should be addressed to the KEMRI Wellcome Data Governance Committee: dgc@kemri-wellcome.org. These data are available through a formal requesting process to the KEMRI Institutional Data Access/Ethics Committee. The details of the guidelines can be found in the KEMRI Wellcome website (https://kemri-wellcome.org/about-us/#ChildVerticalTab_15). <strong> <a href="https://kemri-wellcome.org/zp-content/uploads/2021/02/KWTRP_Dataverse_Data_Request_Form_2019.docx">Click to download Data Request Form</a></strong> |
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Citation Requirement: |
<p>Publications based on this data collection should acknowledge this source by means of bibliographic citation.</p> |
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Notes: |
<p>This data is licensed under the <a href="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</a> <a href="https://creativecommons.org/licenses/by/4.0/legalcode"><img src="https://i.creativecommons.org/l/by/3.0/88x31.png"> </a> </p> |
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Other Study Description Materials |
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File Description--f4656138 |
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File: 00 Multisite Age-specific PYO.tab |
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Notes: |
UNF:6:799jIicR8vk+tQdcAXzITQ== |
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00 Multisite malaria admissions - 3m-9yr Data release (160321).csv |
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Notes: |
text/csv |
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Label: |
cerebral_malaria_models.R |
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type/x-r-syntax |
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CM_model_selection.R |
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type/x-r-syntax |
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composite_models.R |
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type/x-r-syntax |
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Figure_1.R |
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type/x-r-syntax |
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Figure_2.R |
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type/x-r-syntax |
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Figure_3.R |
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type/x-r-syntax |
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Multisite_malaria_admissions_Codebook.pdf |
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application/pdf |
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Multisite_malaria_admissions_Readme.txt |
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text/plain |
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process_data.R |
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type/x-r-syntax |
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RD_model_selection.R |
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type/x-r-syntax |
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SMA_model_selection.R |
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type/x-r-syntax |
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SMA_RD_models.R |
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type/x-r-syntax |
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Label: |
Smith_algorithm.R |
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Notes: |
type/x-r-syntax |