Medical Countermeasures Analysis of 2019-nCoV / SARS-CoV-2 for COVID-19 (doi:10.7910/DVN/XWVOA8)

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Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Part 5: Other Study-Related Materials
Entire Codebook

Document Description

Citation

Title:

Medical Countermeasures Analysis of 2019-nCoV / SARS-CoV-2 for COVID-19

Identification Number:

doi:10.7910/DVN/XWVOA8

Distributor:

Harvard Dataverse

Date of Distribution:

2020-02-26

Version:

1

Bibliographic Citation:

Ricke, Darrell, 2020, "Medical Countermeasures Analysis of 2019-nCoV / SARS-CoV-2 for COVID-19", https://doi.org/10.7910/DVN/XWVOA8, Harvard Dataverse, V1, UNF:6:4ZH/MQtv8npAZav9ewMyYw== [fileUNF]

Study Description

Citation

Title:

Medical Countermeasures Analysis of 2019-nCoV / SARS-CoV-2 for COVID-19

Identification Number:

doi:10.7910/DVN/XWVOA8

Authoring Entity:

Ricke, Darrell (MIT Lincoln Laboratory)

Distributor:

Harvard Dataverse

Access Authority:

Ricke, Darrell

Depositor:

Ricke, Darrell

Date of Deposit:

2020-02-26

Holdings Information:

https://doi.org/10.7910/DVN/XWVOA8

Study Scope

Keywords:

Medicine, Health and Life Sciences

Abstract:

SARS-CoV-2 viral protein multiple sequence alignments and Flux variation analysis

Methodology and Processing

Sources Statement

Data Access

Notes:

<a href="http://creativecommons.org/publicdomain/zero/1.0">CC0 1.0</a>

Other Study Description Materials

File Description--f3738120

File: 2019-CoV Flux-1.tab

  • Number of cases: 75

  • No. of variables per record: 10

  • Type of File: text/tab-separated-values

Notes:

UNF:6:4ZH/MQtv8npAZav9ewMyYw==

Flux variation results

Variable Description

List of Variables:

Variables

Position

f3738120 Location:

Summary Statistics: Valid 75.0; StDev 21.79449471770337; Min. 24.0; Mean 61.0; Max. 98.0

Variable Format: numeric

Notes: UNF:6:zql0SVdsAX/yAUU3kg9Q2w==

Flux

f3738120 Location:

Variable Format: character

Notes: UNF:6:6+bqcEDz6kt6ZO/dvKLaLw==

AA

f3738120 Location:

Variable Format: character

Notes: UNF:6:VVGGDoaD0uIRfoiRjvBagA==

#

f3738120 Location:

Summary Statistics: Min. 2.0; Mean 66.42666666666666; Max. 77.0; Valid 75.0; StDev 20.945988026694142;

Variable Format: numeric

Notes: UNF:6:Ud8czryH7ZxLmPwUxpSJbA==

N

f3738120 Location:

Summary Statistics: Mean 2.1866666666666665; StDev 1.1353453258850406; Min. 1.0; Max. 7.0; Valid 75.0

Variable Format: numeric

Notes: UNF:6:DeGvse9AQkjygzX15l8QJQ==

color

f3738120 Location:

Variable Format: character

Notes: UNF:6:BLsltrIzN5pRBDVcV5mm5Q==

residue

f3738120 Location:

Summary Statistics: Valid 58.0; Min. 8.0; StDev 16.886878535320456; Max. 65.0; Mean 36.5;

Variable Format: numeric

Notes: UNF:6:7OAXcT5d79u8pTfa6zkxmg==

5X29.pdb

f3738120 Location:

Variable Format: character

Notes: UNF:6:yaFtwia913YrthryC0XRTg==

chain

f3738120 Location:

Variable Format: character

Notes: UNF:6:4oMXpxYAl2LNlrIu4BDjSg==

residue

f3738120 Location:

Summary Statistics: Valid 58.0; StDev 16.886878535320456; Min. 8.0; Max. 65.0; Mean 36.5;

Variable Format: numeric

Notes: UNF:6:7OAXcT5d79u8pTfa6zkxmg==

Other Study-Related Materials

Label:

1ab-1.mfa

Text:

Polyprotein 1ab

Notes:

application/octet-stream

Other Study-Related Materials

Label:

E-1.mfa

Text:

E

Notes:

application/octet-stream

Other Study-Related Materials

Label:

M-1.mfa

Text:

M

Notes:

application/octet-stream

Other Study-Related Materials

Label:

N-1.mfa

Text:

N

Notes:

application/octet-stream

Other Study-Related Materials

Label:

nsp12-1.mfa

Text:

nsp12

Notes:

application/octet-stream

Other Study-Related Materials

Label:

orf10-1.mfa

Text:

ORF10

Notes:

application/octet-stream

Other Study-Related Materials

Label:

orf3a-1.mfa

Text:

ORF3a

Notes:

application/octet-stream

Other Study-Related Materials

Label:

orf6-1.mfa

Text:

ORF6

Notes:

application/octet-stream

Other Study-Related Materials

Label:

orf7a-1.mfa

Text:

ORF7a

Notes:

application/octet-stream

Other Study-Related Materials

Label:

orf7b-1.mfa

Text:

ORF7b

Notes:

application/octet-stream

Other Study-Related Materials

Label:

orf8-1.mfa

Text:

ORF8

Notes:

application/octet-stream

Other Study-Related Materials

Label:

S-1.mfa

Text:

Spike (S)

Notes:

application/octet-stream