|
View: |
Part 1: Document Description
|
|
Citation |
|
|---|---|
|
Title: |
Surveillance and diagnostics dataset on Sri Lankan cassava mosaic virus (Fam. Geminiviridae) and CMD in Thailand |
|
Identification Number: |
doi:10.7910/DVN/Z5TR2F |
|
Distributor: |
Harvard Dataverse |
|
Date of Distribution: |
2020-06-25 |
|
Version: |
1 |
|
Bibliographic Citation: |
Siriwan, Wanwisa; Jiménez, Jenyfer; Hemniam, Nuannapa; Saokham, Kingkan; Cuellar, Wilmer, 2020, "Surveillance and diagnostics dataset on Sri Lankan cassava mosaic virus (Fam. Geminiviridae) and CMD in Thailand", https://doi.org/10.7910/DVN/Z5TR2F, Harvard Dataverse, V1, UNF:6:v47oLjxsXGUV4c83qrYVYQ== [fileUNF] |
|
Citation |
|
|
Title: |
Surveillance and diagnostics dataset on Sri Lankan cassava mosaic virus (Fam. Geminiviridae) and CMD in Thailand |
|
Identification Number: |
doi:10.7910/DVN/Z5TR2F |
|
Authoring Entity: |
Siriwan, Wanwisa (Kasetsart University) |
|
Jiménez, Jenyfer (International Center for Tropical Agriculture - CIAT) |
|
|
Hemniam, Nuannapa (Kasetsart University) |
|
|
Saokham, Kingkan (Kasetsart University) |
|
|
Cuellar, Wilmer (International Center for Tropical Agriculture - CIAT) |
|
|
Producer: |
Kasetsart University |
|
Centro Internacional de Agricultura Tropical |
|
|
Center for Agricultural Biotechnology |
|
|
Center of Excellence on Agricultural Biotechnology |
|
|
Date of Production: |
2020 |
|
Distributor: |
Harvard Dataverse |
|
Distributor: |
International Center for Tropical Agriculture |
|
Access Authority: |
Alliance Data Management |
|
Depositor: |
Garcia, Carolina |
|
Date of Deposit: |
2020-06-04 |
|
Holdings Information: |
https://doi.org/10.7910/DVN/Z5TR2F |
|
Study Scope |
|
|
Keywords: |
Agricultural Sciences, Earth and Environmental Sciences, Cassava, Sri Lankan cassava mosaic virus, Genome surveillance, South East Asia, Disease diagnostics, Disease surveillance, Epidemiology, Latin America and the Caribbean, Crops for Nutrition and Health |
|
Topic Classification: |
Plant viruses |
|
Abstract: |
Emergent agricultural pathogens cause severe damage worldwide. Standard surveillance and diagnostic protocols need to be evaluated and implemented at regional level, particularly with diseases caused by a wide range of pathogens that can induce similar symptoms. This dataset provides a description of surveillance and diagnostics data for CMD in Thailand (2019), indicating location of the surveyed fields, presence of visual symptoms, symptom severity and PCR-diagnostic results with two primer sets, both of them targeting the CP region. All samples were collected using a standard protocol as described in the associated manuscript. More information is available upon request. |
|
Date of Collection: |
2019-05-28-2019-07 |
|
Country: |
Thailand |
|
Universe: |
Cassava leaf samples collected in fields from Thailand diagnosed to detect the presence of Sri Lankan cassava mosaic virus, Cassava common mosaic virus and Cassava-torrado like virus |
|
Kind of Data: |
Survey Data |
|
Kind of Data: |
Crop Protection Data |
|
Notes: |
Cassava leaf samples collected in fields from Thailand diagnosed to detect the presence of Sri Lankan cassava mosaic virus, Cassava common mosaic virus and Cassava-torrado like virus |
|
Methodology and Processing |
|
|
Sources Statement |
|
|
Data Access |
|
|
Notes: |
<P><a rel="license" href="http://creativecommons.org/licenses/by/4.0/" target="_blank"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by/4.0/88x31.png" /></a><br /> These data and documents are licensed under a <a href="http://creativecommons.org/licenses/by/4.0/" target="_blank"> Creative Commons Attribution 4.0 International license.</a> You may copy, distribute and transmit the data as long as you acknowledge the source through proper <a href="http://best-practices.dataverse.org/data-citation/" target="_blank">data citation</a>.</P> |
|
Other Study Description Materials |
|
|
Related Materials |
|
|
Cuellar WJ, Mwanzia L, Lourido D, Garcia C, Martínez A, Cruz P, Pino L, Tohme J. 2018. PestDisPlace: Monitoring the Distribution of Pests and Diseases. Available at: <a href="https://pestdisplace.org"> pestdisplace.org</a> Version 2.0 |
|
|
Related Publications |
|
|
Citation |
|
|
Title: |
Wanwisa Siriwan, Jenyfer Jimenez, Nuannapa Hemniam, Kingkan Saokham, Diana Lopez-Alvarez, Ana M. Leiva, Andres Martinez, Leroy Mwanzia, Luis A. Becerra Lopez-Lavalle, Wilmer J. Cuellar, Surveillance and diagnostics of the emergent Sri Lankan cassava mosaic virus (Fam. Geminiviridae) in Southeast Asia, Virus Research, Volume 285, 2020, 197959, ISSN 0168-1702 |
|
Identification Number: |
10.1016/j.virusres.2020.197959 |
|
Bibliographic Citation: |
Wanwisa Siriwan, Jenyfer Jimenez, Nuannapa Hemniam, Kingkan Saokham, Diana Lopez-Alvarez, Ana M. Leiva, Andres Martinez, Leroy Mwanzia, Luis A. Becerra Lopez-Lavalle, Wilmer J. Cuellar, Surveillance and diagnostics of the emergent Sri Lankan cassava mosaic virus (Fam. Geminiviridae) in Southeast Asia, Virus Research, Volume 285, 2020, 197959, ISSN 0168-1702 |
|
File Description--f3868452 |
|
|
File: 02. Data.tab |
|
|
|
|
Notes: |
UNF:6:P8n1G7allg9UZ6fRP+Zdlg== |
|
Samples |
|
|
File Description--f3868451 |
|
|
File: 03. Data with GPS.tab |
|
|
|
|
Notes: |
UNF:6:/u6Yj3kMUFZcP8Qu6/gAlA== |
|
Samples |
|
|
List of Variables: |
|
|
Variables |
|
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:TTbcafcD2ZLEaUrfPfmJcw== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:BkbjFUYHbOeBKv3gRTm4Fg== |
|
f3868452 Location: |
Summary Statistics: Mean 2.01905416E7; StDev 34.99830666068253; Valid 600.0; Max. 2.0190611E7; Min. 2.0190518E7 Variable Format: numeric Notes: UNF:6:oXclGTFxprNt8aDTowTy3Q== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:xliYZNgz+kMmwc+T+1F3EA== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:uu1EHjCVIn1Gv+tGSedN0Q== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:PMQHy10O6X+6fYbgcvXpdg== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:s5ZIB0xt4UFsZyZPVYNpsA== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:U+4mBYZSXLHUYWcHQaJC7Q== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:BIacujr8xKq1etnec1ND8g== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:U+4mBYZSXLHUYWcHQaJC7Q== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:9lfDOnkZH8uHxXY4n/nvPw== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:6KEW6W66aRt2CWrjM/SWGw== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:fZ1scQrE95TXQSbERO9HwA== |
|
f3868452 Location: |
Variable Format: character Notes: UNF:6:fZ1scQrE95TXQSbERO9HwA== |
|
Label: |
01. Dictionary.xls |
|
Text: |
This table contains the list of parameters measured in the field and laboratory with their description and units. |
|
Notes: |
application/vnd.ms-excel |