Replication Data for: Respiratory Syncytial Virus Seasonality in Three Epidemiological Zones of Kenya.

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Replication Data for: Respiratory Syncytial Virus Seasonality in Three Epidemiological Zones of Kenya.
Rose, Erica Billig; Nyawanda,Bryan O.; Munywoki, Patrick K.; Murunga, Nickson; Bigogo, Godfrey M.; Otieno, Nancy A.; Onyango, Clayton; Chaves, Sandra S.; Verani, Jennifer R.; Emukule, Gideon O.; Widdowson, Marc-Alain; Nokes, D. James; Gerber, Susan I.; Langley, Gayle E., 2021, "Replication Data for: Respiratory Syncytial Virus Seasonality in Three Epidemiological Zones of Kenya.", https://doi.org/10.7910/DVN/3BC9JK, Harvard Dataverse, V1, UNF:6:AsnomOKgzg6zrFKjmtO+Bw== [fileUNF]
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Description

This is a replication dataset for the published article: "Respiratory Syncytial Virus Seasonality in Three Epidemiological Zones of Kenya."

This data is part of a study conducted to understand RSV circulation over multiple seasons in three counties in Kenya (Nairobi, Siaya, and Kilifi) during 2006-2018. It contains the date of sample collection, month and year of sample collection, number of tested samples, number detected to have RSV, and RSV proportion positives.

Subject Medicine, Health and Life Sciences
Related Publication Rose, E.B., Nyawanda, B.O., Munywoki, P.K., Murunga, N., Bigogo, G.M., Otieno, N.A., Onyango, C., Chaves, S.S., Verani, J.R., Emukule, G.O. and Widdowson, M.A., 2021. Respiratory syncytial virus seasonality in three epidemiological zones of Kenya. Influenza and Other Respiratory Viruses, 15(2), pp.195-201.doi: 10.1111/irv.12810
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Data Access: Open

License: Creative Commons Attribution 4.0 International

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EricaBillig2020_Dataset_Codebook.pdf
EricaBillig2020_Dataset_Codebook.pdf
Adobe PDF - 97.4 KB
Published Nov 22, 2021
10 Downloads
MD5: 9b4d37d5d185035f2e00d32f142f656d
DocumentationData Dictionary/Variable Codebook
Preview "EricaBillig2020_Dataset_Codebook.pdf"
EricaBillig2020_Data_Readme_File.txt
Plain Text - 4.9 KB
Published Nov 22, 2021
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MD5: 106cdce0bfae68fdd630453ef9f82e28
DocumentationReadme
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agg_kili.tab
Tabular Data - 21.7 KB
Published Nov 22, 2021
21 Downloads
6 Variables, 676 Observations UNF:6:cBhpKMtb5odBSUsr3PSgvQ==
aggregated data for Kilifi site
Datacsv
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agg_kis.tab
Tabular Data - 21.0 KB
Published Nov 22, 2021
11 Downloads
6 Variables, 678 Observations UNF:6:osuxaJoVDLh7AUrfxxSGhA==
aggregated data for Kisumu Site
Datacsv
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agg_nai.tab
Tabular Data - 18.1 KB
Published Nov 22, 2021
11 Downloads
6 Variables, 671 Observations UNF:6:UIUPoqc/dcb7PZfomhDGjA==
aggregated data for Nairobi site
Datacsv
Preview "agg_nai.tab" Preview "agg_nai.tab"
RSV_seasonality_code.R
R Syntax - 12.3 KB
Published Nov 22, 2021
16 Downloads
MD5: 350769811712c9d71a6ee3239278e4b5
Codes contained in this script are used to generates information on the number of specimens that were tested for RSV and moving average percentages that were positive by week and county
CodeR Script
Preview "RSV_seasonality_code.R"
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