Replication Data for: Biomarkers of post-discharge mortality among children with complicated severe acute malnutrition

Version 1.1
Replication Data for: Biomarkers of post-discharge mortality among children with complicated severe acute malnutrition
Njunge, James M.; Gwela, Agnes; Kibinge, Nelson K.; Ngari, Moses M.; Nyamako, Lydia; Nyatichi, Emily; Thitiri, Johnstone; Gonzales, Gerard B.; Bandsma, Robert H.J.; Walson, Judd; Gitau, Evelyn; Berkley, James A., 2021, "Replication Data for: Biomarkers of post-discharge mortality among children with complicated severe acute malnutrition", https://doi.org/10.7910/DVN/CEQ1OL, Harvard Dataverse, V1, UNF:6:k27M1p2R9dL6pZ6YDJLFfQ== [fileUNF]
Learn about Data Citation Standards.
Dataset Metrics
49 Downloads
Description

This was a nested case control study within a clinical trial (NCT00934492) that tested the efficacy of daily co‐trimoxazole prophylaxis in reducing post‐discharge mortality among HIV‐uninfected children aged 2-59 months hospitalised with CSM in two urban (Mombasa and Nairobi) and two rural (Kilifi and Malindi) hospitals in Kenya. We investigated mechanisms underlying early post-discharge mortality (<60 days) using untargeted plasma proteome, targeted cytokines/chemokines, leptin, and soluble CD14 (sCD14) measured after hospital stabilisation (at discharge).

Data package includes:

  1. Njunge_Sci_Rep_s41598-019-42436-y.dta and (b) Njunge_Sci_Rep_s41598-019-42436-y.csv: Both files contain similar information. The files contains anthropometric at the time of hospital discharge for study children. It also contains full blood count at enrolment. Anthropometric z scores calculated using 2006 WHO growth references. Study data were entered into OpenClinical trial database. After locking the trial database, the data were extracated and exported to STATA Version 15.1 for statistical analysis.
  2. Njunge_Sci_Rep_s41598-019-42436-y.do This analysis script is used to generate the summary participants characteristics at enrolment and conduct regression analysis.
  3. Data Dictionary: contains variable descriptions and value labels
Subject Medicine, Health and Life Sciences
Keyword severe malnutrition, child growth, weight, mid-upper arm circumference, anthropometric deficit, inflammation, cytokines, proteome
Related Publication Njunge, J.M., Gwela, A., Kibinge, N.K., Ngari, M., Nyamako, L., Nyatichi, E., Thitiri, J., Gonzales, G.B., Bandsma, R.H., Walson, J.L. and Gitau, E.N., 2019. Biomarkers of post-discharge mortality among children with complicated severe acute malnutrition. Scientific reports, 9(1), pp.1-12.doi: 10.1038/s41598-019-42436-y
Notes

Data Access: Open

License: Creative Commons Attribution 4.0 International

License/Data Use Agreement

Custom Dataset Terms

Filter by
1 to 5 of 5 Files
Njunge_Sci_Rep_s41598_019_42436_y_Codebook.pdf
Njunge_Sci_Rep_s41598_019_42436_y_Codebook.pdf
Adobe PDF - 665.5 KB
Published Oct 22, 2021
8 Downloads
MD5: 5498965c125daaa4fbdbf192e2636bfb
DocumentationVariable Codebook/Data Dictionary
Preview "Njunge_Sci_Rep_s41598_019_42436_y_Codebook.pdf"
Njunge_Sci_Rep_s41598_Readme.txt
Plain Text - 7.8 KB
Published Oct 22, 2021
7 Downloads
MD5: 83ef50fbee0ae5d4791ae62578b6627e
DocumentationReadme File
Preview "Njunge_Sci_Rep_s41598_Readme.txt"
Njunge_Sci_Rep_s41598_019_42436_y_anon-1.tab
Tabular Data - 844.1 KB
Published Oct 22, 2021
12 Downloads
534 Variables, 241 Observations UNF:6:vv5gI8HyG1Sz8ikuEGzTCA==
DataCSV
Preview "Njunge_Sci_Rep_s41598_019_42436_y_anon-1.tab" Preview "Njunge_Sci_Rep_s41598_019_42436_y_anon-1.tab"
Njunge_Sci_Rep_s41598_019_42436_y_anon.tab
Tabular Data - 893.3 KB
Published Oct 22, 2021
15 Downloads
534 Variables, 241 Observations UNF:6:p2C9c47PBSoyboloocIZzQ==
DataSTATA (v15.1)
Preview "Njunge_Sci_Rep_s41598_019_42436_y_anon.tab" Preview "Njunge_Sci_Rep_s41598_019_42436_y_anon.tab"
Njunge_Sci_Rep_s41598-019-42436-y.do
Stata Syntax - 3.4 KB
Published Oct 22, 2021
7 Downloads
MD5: cf2da889360e224eb678fb2821d30245
CodeSTATA (v15.1)
Preview "Njunge_Sci_Rep_s41598-019-42436-y.do"
Edit File

This file has already been deleted (or replaced) in the current version. It may not be edited.

Restrict Access

Restricting limits access to published files. People who want to use the restricted files can request access by default. If you disable request access, you must add information about access to the Terms of Access field.

Learn about restricting files and dataset access in the User Guide.

Enable access request
You must enable request access or add terms of access to restrict file access.
Save Changes
Edit Embargo

The selected file or files have already been published. Contact an administrator to change the embargo date or reason of the file or files.
Edit Retention Period

The selected file or files have already been published. Contact an administrator to change the retention period date or reason of the file or files.
Delete Files

The file will be deleted after you click on the Delete button.

Files will not be removed from previously published versions of the dataset.

Select File(s)

Please select one or more files.

Share Dataset

Share this dataset on your favorite social media networks.

Continue
Dataset Citations

Citations for this dataset are retrieved from Crossref via DataCite using Make Data Count standards. For more information about dataset metrics, please refer to the User Guide.

Sorry, no citations were found.
Inaccessible Files Selected

The selected file(s) may not be downloaded because you have not been granted access or the file(s) have a retention period that has expired or the files can only be transferred via Globus.

Ineligible Files Selected

The selected file(s) may not be transferred because you have not been granted access or the file(s) have a retention period that has expired or the files are not Globus accessible.

Download Options

The files selected are too large to download as a ZIP.

You can select individual files that are below the 15.0 GB download limit from the files table, or use the Data Access API for programmatic access to the files.

Select File(s)

Please select a file or files to be downloaded.

Inaccessible Files Selected

The selected file(s) may not be downloaded because you have not been granted access or the file(s) have a retention period that has expired.

Click Continue to download the files you have access to download.

Ineligible Files Selected

Some file(s) cannot be transferred. (They are restricted, embargoed, with an expired retention period, or not Globus accessible.)

Click Continue to transfer the elligible files.

Delete Dataset

Are you sure you want to delete this dataset and all of its files? You cannot undelete this dataset.

Delete Draft Version

Are you sure you want to delete this draft version? Files will be reverted to the most recently published version. You cannot undelete this draft.

Unpublished Dataset Preview URL

Preview URL can only be used with unpublished versions of datasets.

Unpublished Dataset Preview URL

Are you sure you want to disable the Preview URL? If you have shared the Preview URL with others they will no longer be able to use it to access your unpublished dataset.

Delete Files

The file(s) will be deleted after you click on the Delete button.

Files will not be removed from previously published versions of the dataset.

Compute

This dataset contains restricted files you may not compute on because you have not been granted access.

Deaccession Dataset

Are you sure you want to deaccession? This is permanent and the selected version(s) will no longer be viewable by the public.

Deaccession Dataset

Are you sure you want to deaccession this dataset? This is permanent an it will no longer be viewable by the public.

Version Differences Details

Please select two versions to view the differences.

Version Differences Details
 
Version:
Last Updated:
Version:
Last Updated:
Select File(s)

Please select a file or files for access request.

Select File(s)

Embargoed files cannot be accessed. Please select an unembargoed file or files for your access request.

Edit Tags

Select existing file tags or create new tags to describe your files. Each file can have more than one tag.

Request Access

  You need to Sign Up or Log In to request access.

Dataset Terms

Please confirm and/or complete the information needed below in order to request access to files in this dataset.

This dataset is made available under the following terms. Please confirm and/or complete the information needed below in order to continue.

Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation shown on the dataset page.

Custom Dataset Terms - the following Custom Dataset Terms have been defined for this dataset.

This data is licensed under the Creative Commons Attribution 4.0 International

Publications based on this data collection should acknowledge this source by means of bibliographic citation.

Preview Guestbook

Upon downloading files the guestbook asks for the following information.

Account Information

Package File Download

Use the Download URL in a Wget command or a download manager to download this package file. Download via web browser is not recommended. User Guide - Downloading a Dataverse Package via URL

https://qa.dataverse.org/api/access/datafile/

Compute Batch
Clear Batch
Dataset Persistent Identifier Change Compute Batch
Compute Batch
Submit for Review

You will not be able to make changes to this dataset while it is in review.

Publish Dataset

Are you sure you want to republish this dataset?

By default datasets are published with the CC0-“Public Domain Dedication” waiver. Learn more about the CC0 waiver here.

To publish with custom Terms of Use, click the Cancel button and go to the Terms tab for this dataset.

Select if this is a minor or major version update.

Publish Dataset

This dataset cannot be published until Clinical Research is published by its administrator.

Publish Dataset

This dataset cannot be published until Clinical Research and KWTRP Research Data Repository are published.

Return to Author

Return this dataset to contributor for modification. The reason for return entered below will be sent by email to the author.

Curation Status History
StatusDateAssigner
No records found.
Add/Edit a Version Note
Styled Citation