Replication Data for: Detection of SARS-CoV-2 variant 501Y.V2 in Comoros Islands in January 2021

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Replication Data for: Detection of SARS-CoV-2 variant 501Y.V2 in Comoros Islands in January 2021
Agoti, Charles N.; Githinji, George; Mohammed, Khadija S.; Lambisia, Arnold W.; De Laurent, Zaydah R.; Morobe, John M.; Mburu, Maureen W.; Ong'era, Edidah M.; Otieno, Edward; Azali, Hamza Abdou; Abdallah, Kamal Said; Diarra, Abdoulaye; Yahaya, Ali Ahmed; Athanasius, Dratibi Fred; Moeletsi, Nicksy Gumede; Tsofa, Benjamin; Bejon, Philip; Borus, Peter; Nokes, David James; Ochola-Oyier, Isabella, 2021, "Replication Data for: Detection of SARS-CoV-2 variant 501Y.V2 in Comoros Islands in January 2021", https://doi.org/10.7910/DVN/NDOIQ2, Harvard Dataverse, V2, UNF:6:fbZB4rfcSnOpndHaOqL4UA== [fileUNF]
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Description

This a replication dataset for the manuscript titled: "Detection of SARS-CoV-2 variant 501Y.V2 in Comoros Islands in January 2021."

This dataset is part of the continuous genomic surveillance of SARS-CoV-2 courtesy of the Laboratory Sequencing Network created by WHO-AFRO and AFRICA-CDC. This dataset contains results of samples positive for SARS-CoV-2 by real-time PCR for the period 5th January 2020-10th January 2020. Aside from the samples tested and results of the tests, it also contains the patients’ sociodemographic characteristic and cycle threshold.The dataset is used to generate new SARS-CoV-2 genome sequences from RT-PCR positive samples collected from individuals suspected with SARS-CoV-2 in Comoros islands.

The six genomes have been deposited in GISAID (Accession numbers EPI_ISL_1323658 - EPI_ISL_1323663).

Subject Medicine, Health and Life Sciences
Keyword SARS-CoV-2, COVID-19, 501Y.V2, Comoros Islands
Notes License: Creative Commons Attribution 4.0 International
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CAgoti_Comoros_Genome_Codebook.pdf
CAgoti_Comoros_Genome_Codebook.pdf
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Published May 25, 2021
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MD5: 51dc12c64063fed83a337d749ba00182
DocumentationVariable Codebook/Data Dictionary
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CAgoti_Comoros_Genome_Readme.txt
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Published May 25, 2021
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MD5: 3b827ed9d8b5674b4b85bc17a44feca1
DocumentationReadme
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gisaid_hcov-19_acknowledgement_table_2021_06_12_18.pdf
gisaid_hcov-19_acknowledgement_table_2021_06_12_18.pdf
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Published Jun 24, 2021
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MD5: 3f47ed087268b13627d2b4f4f2d2faf4
DocumentationAcknowledgement table
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DATA_Table-1.tab
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Published May 25, 2021
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6 Variables, 1047918 Observations UNF:6:SokZWMl6HMP9FRRxArSGXQ==
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DATA_Table.tab
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6 Variables, 1047918 Observations UNF:6:wpLlGMeiqqPTrPubiGm5JQ==
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