Replication Data for: Genomic epidemiology of the rotavirus G2P[4] strains in coastal Kenya pre- and post-rotavirus introduction, 2012-2018

Version 2.0
Replication Data for: Genomic epidemiology of the rotavirus G2P[4] strains in coastal Kenya pre- and post-rotavirus introduction, 2012-2018
Makori, Timothy O.; Bargul, Joel L.; Lambisia, Arnold W.; Mwanga, Mike J.; Murunga, Nickson; Laurent, Zaydah R. de; Lewa, Clement S.; Mutunga, Martin; Phan, My; Cotten, Matthew; Nokes, D. James; Agoti, Charles N., 2022, "Replication Data for: Genomic epidemiology of the rotavirus G2P[4] strains in coastal Kenya pre- and post-rotavirus introduction, 2012-2018", https://doi.org/10.7910/DVN/P4MRVF, Harvard Dataverse, V2, UNF:6:e4hg8SwBmbmyUhd1xr3zFw== [fileUNF]
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Description

This is a replication dataset for the manuscript titled: "Genomic epidemiology of the rotavirus G2P[4] strains in coastal Kenya pre- and post-rotavirus introduction, 2012-2018."

The dataset is part of the study investigating genomic epidemiology of rotavirus A strains circulating among children admitted to Kilifi County Hospital following routine vaccination. The dataset contains the participants' social demographic characteristics, vaccination status, narrows down to participants infected with the G2P[4] strain from 2012 to 2018. The dataset was used to generate genome sequences for G2P[4] strains from the G2P[4] genotyping of the VP7 and VP4 genes.

Subject Medicine, Health and Life Sciences
Keyword G2P[4] genomes, Rotarix vaccination
Notes

Data Access: Open

License: Creative Commons Attribution 4.0 International

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Makori_G2P4_data_codebook.pdf
Makori_G2P4_data_codebook.pdf
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DocumentationData Dictionary/Variable Codebook
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Makori_G2P4_data_readme.txt
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G2P4_baseline_data-1.tab
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Published Oct 21, 2022
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9 Variables, 429 Observations UNF:6:8lghPmGbZq6YzU9ZmYRwig==
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G2P4_baseline_data.tab
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9 Variables, 429 Observations UNF:6:7ULWGL+yvI19xK+RK105vg==
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Rota_G2P4_Diarrhea_Trends-1.tab
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Published Oct 21, 2022
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6 Variables, 84 Observations UNF:6:ZslFM+ul5J1Ou9LSXhIjZg==
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Rota_G2P4_Diarrhea_Trends.tab
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6 Variables, 84 Observations UNF:6:ZslFM+ul5J1Ou9LSXhIjZg==
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Baseline_characteristic_table.do
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G2P4_Rotavirus_Diarrhea_Trend.do
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