Archival repository of raw data, R scripts, R objects, and other items needed to replicate results from research publications of Phil Novack-Gottshall and colleagues.
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1 to 10 of 164 Results
Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Dec 30, 2023 - Nature Ecology & Evolution 2022: Morphological volatility precedes ecological innovation in early echinoderms
Novack-Gottshall, Phil, 2023, "Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)", https://doi.org/10.7910/DVN/20BEYV, Harvard Dataverse, V2, UNF:6:38hegb1IwsPE2/KKDB69FQ== [fileUNF]
Raw data files used in analyses.
Data S2 - EchinoTree_Morph.nex
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Unknown - 174.8 KB - MD5: fbb004b567cd11e2bab41ebe9ce1c726
‘EchinoTree_Morph.nex’ is a NEXUS file containing the anatomical character-state matrix for 413 anatomical characters for 366 Cambrian–Ordovician echinoderm tip genera used in morphological analyses. See “Compiling and formatting morphological and ecological data sets” in Methods above for additional details of coding schema. The file excludes the...
Data S3 - EchinoTree_Mode.nex
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Unknown - 23.3 KB - MD5: aa930265464253f1ae3aa336523cc563
‘EchinoTree_Mode.nex’ is a NEXUS file containing the anatomical character-state matrix for 40 life-habit characters for 366 Cambrian–Ordovician echinoderm tip genera used in morphological analyses, using the 'mode' life-habit propagation algorithm. See “Compiling and formatting morphological and ecological data sets” in Methods above for additional...
Data S4 - EchinoTree_Constant.nex
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Unknown - 23.3 KB - MD5: 833bb8af0e00b23b44bd2a9202146317
‘EchinoTree_Constant.nex’ is a NEXUS file containing the anatomical character-state matrix for 40 life-habit characters for 366 Cambrian–Ordovician echinoderm tip genera used in morphological analyses, using the constant' life-habit propagation algorithm. See “Compiling and formatting morphological and ecological data sets” in Methods above for add...
Data S5 - EchinoTree_Raw.nex
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Unknown - 23.3 KB - MD5: bba0337f7dc68e0e0d7502a3feb8c9ea
‘EchinoTree_Raw.nex’ is a NEXUS file containing the anatomical character-state matrix for 40 life-habit characters for 366 Cambrian–Ordovician echinoderm tip genera used in morphological analyses, using the 'raw' life-habit propagation algorithm. See “Compiling and formatting morphological and ecological data sets” in Methods above for additional d...
Data S1 - cal3trees
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
R Data - 6.7 MB - MD5: 5baf5725eb7d0d9a4db663251b6a6397
R object of class ape::phylo that contains 50 ‘cal3’ time-scaled phylogenies used in all analyses, after removing zero-length branches and adjusting the root time accordingly. Contributed by Colin Sumrall (2021-10-04)
DelineMorphData_NAReformatted.tab
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Tabular Data - 639.1 KB - 427 Variables, 366 Observations - UNF:6:IkLJf//BswvwbKRRPCNnHw==
Morphological data set of 413 anatomical characters for 366 Cambrian-Ordovician echinoderm genera (2020-07-13)
EchinoLHData_Constant_NAReformatted.tab
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Tabular Data - 124.3 KB - 60 Variables, 366 Observations - UNF:6:f4VtzNb1wkjsNONUXPZfYQ==
Ecological data set ("constant" treatment) of 40 life-habit characters for 366 Cambrian-Ordovician echinoderm genera (2020-07-13)
EchinoLHData_Mode_NAReformatted.tab
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Tabular Data - 102.8 KB - 60 Variables, 366 Observations - UNF:6:LFaOsTB26YEjdR11gO72qw==
Ecological data set ("mode" treatment) of 40 life-habit characters for 366 Cambrian-Ordovician echinoderm genera (2020-07-13)
EchinoLHData_Raw_NAReformatted.tab
Dec 30, 2023 - Data files Novack-Gottshall, et al., 2022 (Nature Ecology & Evolution)
Tabular Data - 126.6 KB - 60 Variables, 366 Observations - UNF:6:N95c4aQ2oRdiwQ7PS/yHQw==
Life habit data set ("raw" propagation) for 366 Cambrian-Ordovician echinoderm genera (2021-10-23)
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