This data repository contains all final files necessary to create population genomic results and figures for the 2025 TPWD Texas Tortoise report.
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README.txt
Jun 11, 2025 - Gopherus berlandieri population genomics variants
Plain Text - 1.3 KB - MD5: d06614b25b627d38e9ab4a60ccaa00d5
Please read for information regarding the files in this collection.
gber_filtered_pruned_final.vcf.gz
May 1, 2025 - Gopherus berlandieri population genomics variants
Gzip Archive - 20.8 MB - MD5: fd49389454cb5bf7ca011290e4323a9d
Filtered, linkage pruned variants in VCF format
gber_filtered_pruned_final.vcf.gz.tbi
May 1, 2025 - Gopherus berlandieri population genomics variants
Gzip Archive - 452.2 KB - MD5: 1cba5d5133feb19a794390132a54eda7
Index file for filtered, linkage-pruned variants in VCF format
README.txt
May 1, 2025 - Gopherus berlandieri population genomics variants
Plain Text - 903 B - MD5: 9081997fdae32bc87054d661ccfcc31f
README file describing the contents and origins of files
workflow.md
May 1, 2025 - Gopherus berlandieri population genomics variants
Markdown Text - 5.3 KB - MD5: 8c2f5ca9e858dbd95e93eaed80a95c8c
Workflow used to generate base-recalibrated, filtered, linkage-pruned variants for analysis
README.txt
May 1, 2025 - Gopherus berlandieri population genomics mapping
Plain Text - 1.4 KB - MD5: 14ebddd4b202c2377026b68a376a05f1
TPWD_Gber_2025_Mapping.gpkg
May 1, 2025 - Gopherus berlandieri population genomics mapping
Unknown - 27.0 MB - MD5: 31ea376ccdc9b46ab18717183ea5f6c9
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