The bioscience department focuses on the molecular biology, epidemiology and immunology of infectious diseases with particular emphasis on the development of vaccines and understanding the transmission of pathogens. We work on malaria, viral pathogens, HIV and bacterial disease, and provide strategic direction to the Laboratory Research Platform

Our work on malaria covers the three life-cycle stages; gametocytes (where we are developing a human challenge model to test transmission blocking immunity and profiling the transmitting population in the community and developing markers of infectiousness); blood stage (where we are identifying the merozoite and red cell surface targets of human immunity and examining the role of parasite exposure on host immunity using a systems immunology approach); and pre-erythrocytic stages where we are examining vaccine-induced immunity.

Field surveillance for acute HIV infection and monitoring of a cohort and collaboration with IAVI has facilitated interests in functional assays (specifically the viral inhibition assay) and on the impact of transmitted drug resistance in Kenya.

We are undertaking work on the genomics of malaria, viral pathogens and bacterial pathogens in order to determine what the source of infection is (i.e. “who infects whom”) in collaboration with the Epidemiology and Demography Department.

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MS Excel Spreadsheet - 31.5 KB - MD5: a9ad061db4c73672040936661245aea0
DocumentationVariable Codebook/Data Dictionary
Describes variable names descriptions and value labels
Tabular Data - 27.1 KB - 6 Variables, 448 Observations - UNF:6:kSBVEvXdHbQmRQsVucNm+A==
csv fileData
List of all mosquito samples used to create database and testing including information on mosquito age
Tabular Data - 38.7 KB - 8 Variables, 442 Observations - UNF:6:dD0Lu4FaviGtp+sxwou/aw==
csv fileData
List of all mosquito samples used to create database and testing including information on mosquito age
Tabular Data - 102.4 KB - 6 Variables, 1946 Observations - UNF:6:UxzPl2/HUz2/UmSCiFKUJQ==
csv fileData
List of all mosquito samples used to create database and testing including information on mosquito age
Tabular Data - 26.6 KB - 8 Variables, 357 Observations - UNF:6:GhyE7zZt+WEbGhxm7aUhpA==
csv fileData
List of all mosquito samples used to create database and testing including information on mosquito age
Tabular Data - 597.0 KB - 20 Variables, 3970 Observations - UNF:6:mvCQj64WTTmzp/zEz4vwDA==
csv fileData
File with genotypic/phenotypic resistance outcome
Adobe PDF - 94.3 KB - MD5: 4ad85ff9d4184b05eaadb7b00b9da36f
DocumentationVariable Codebook/Data Dictionary
Feb 7, 2025
Odongo, Tobias; Omondi, Isaiah; Wanjiku, Caroline; Okoko, Miguel; Kiuru,Caroline; Kariuki, Mercy; Ringera, Isaac; Otieno,Bruno; Yaa, Festus; Furnival-Adams, Joanna; Sanz Gutierrez, Almudena; Otuko, Rachel; Rabinovich, Regina; Mwangangi, Joseph; Chaccour, Carlos; Maia, Marta, 2025, "Replication Data for: Toxicity of ivermectin to bed bugs (Cimex hemipterus) and risk factors associated with infestation in Kwale county, coastal Kenya.", https://doi.org/10.7910/DVN/E5VVGM, Harvard Dataverse, V1, UNF:6:GOl2BK1QYQWxI1Ky/IRvcw== [fileUNF]
This is a replication dataset for the manuscript titled: "Toxicity of ivermectin to bed bugs (Cimex hemipterus) and risk factors associated with infestation in Kwale county, coastal Kenya." Bed bugs (Cimex spp.) are obligate ectoparasites that have long been associated with human dwellings, causing discomfort and psychosocial distress. Conventional...
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