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Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem
Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem
Jun 30, 2025
Mutheo, Agnetor; Bosire, Carren; Jeza, Victor; Githinji, George; Wambua, Sammy, 2025, "Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem", https://doi.org/10.7910/DVN/I5KTMP, Harvard Dataverse, V3
This is a replication dataset for the manuscript titled: "Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem." This dataset includes the samples used in the analysis as well as the results from the analysis and the associated scripts for the article titled "Metagenomic exploration of antimicrobial resistance gene...
Trimming of the reads using Trimmomatic_V2.sh
Jun 30, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem
Shell Script - 1.6 KB - MD5: b9cf6cf1b0ae75f664263ef4bb4da148
Code
script showing the trimming steps and parameters
Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
Jun 26, 2025
Kimotho, John; Mwikali, Kioko; Mudibo, Evans; Muthui, Michelle; Murungi, Linda; Muia, Alfred; Namwoso, Lynn; Kimani, Makobu; Orimbo, John; Ogutu, Benhards; Muema, Daniel; Ndung'u, Thumbi; Rono, Martin; Nduati, Eunice W., 2025, "Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs", https://doi.org/10.7910/DVN/CN5CEU, Harvard Dataverse, V2, UNF:6:AmHvRBwDgpMwE2GvldNKrg== [fileUNF]
This is a replication dataset for the manuscript titled: "Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs ." This dataset was generated as part of a study investigating immunological signatures associated with lifelong malaria exposure among healthy adult...
JKimotho_DATASET_Readme_V2.txt
Jun 26, 2025 - Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
Plain Text - 9.3 KB - MD5: bbf10d683563530e8fc4417de56035c3
DocumentationReadme
Jkimotho_Baseline_Characteristics.tab
Jun 23, 2025 - Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
Tabular Data - 8.4 KB - 23 Variables, 60 Observations - UNF:6:EwwwV1CiWzKU7tpW2Njy4w==
csv fileData
Participant's baseline characteristics
JKimotho_Cytokine_ProcessedData.tab
Jun 23, 2025 - Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
Tabular Data - 13.9 KB - 39 Variables, 60 Observations - UNF:6:9PPgLALHDqCvGQ4wqYxz9w==
csv fileData
Cytokine processed data
JKimotho_Cytokine_RawData.tab
Jun 23, 2025 - Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
Tabular Data - 19.5 KB - 69 Variables, 76 Observations - UNF:6:L29rYTMGE39Xen3AhjC/Ag==
csv fileData
Cytokine raw data
Jkimotho_DATASET_Codebook.xlsx
Jun 23, 2025 - Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
MS Excel Spreadsheet - 256.9 KB - MD5: b7006882b8f94be0be22283e5be8cc6b
DocumentationVariable Codebook/Data Dictionary
JKimotho_ProcessedCPM_SeqData.tab
Jun 23, 2025 - Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
Tabular Data - 10.3 MB - 62 Variables, 14576 Observations - UNF:6:x66s5OUuWzU9Tkcui9OIjw==
Data
Sequence data processed data/counts per million
JKimotho_RawCounts_SeqData.tab
Jun 23, 2025 - Replication Data for: Lifelong malaria exposure drives B cell activation and post-transcriptional regulation while suppressing inflammatory transcriptional programs
Tabular Data - 9.0 MB - 61 Variables, 38378 Observations - UNF:6:l/JcUffs5TElOG+XRU3q5Q==
csv fileData
Sequence data raw RNA counts
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