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21 to 30 of 385 Results

ARGs Annotation and Drug Classification.docx Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem MS Word - 15.9 KB - MD5: 1ac9cf83114d9f70d1e745feeef5f04f Code This table clssifies the genes into different drug classes and thecorresponsing resistance mechanism
Assembly of the trimmed reads using Megahit.sh Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem Shell Script - 1.1 KB - MD5: a6f6ea519c067665a975d16df1002f6c Code script showing the steps followed in assembly
Binning of the contigs using MetaBat2.sh Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem Shell Script - 961 B - MD5: e8023cf282e973e73ab920bf27a96b59 Code script showing the binning command used
Bins quality check using checkM.sh Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem Shell Script - 1.2 KB - MD5: 03defa4b6dd1570b28d996fb347bead5 Code scripts showing quality checks process for the resulting bins
Quality check of the samples using FastQC.sh Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem Shell Script - 892 B - MD5: 89ebed79a74d940b1b29e41c5b47ff78 Code script showing the quaity check steps for the raw data
Sequence samples accession numbers from ENA and their corresponding locations.docx Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem MS Word - 16.6 KB - MD5: 73faa858ac463454868cf1a8d14ebdc0 Accession NumbersData
Stress Resistance genes obtained from AMRFinderPlus Analysis.docx Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem MS Word - 14.1 KB - MD5: b16db264ef30cd2f7b61f548cb4e1f08 Data This contains the 'plus' stress resistnce genes showing metal resistance obtained from the AMRFinderPlus analysis
Achieng_et_al_Data Dictionary.pdf Mar 17, 2025 - Replication Data for: Characterizing Plasmodium falciparum genetic diversity and complexity of infections in clinical malaria infections in Western and Coastal Kenya using the poly-alpha microsatellite marker Adobe PDF - 118.8 KB - MD5: f7005a823f574cf0a722ed94ec069ea6 DocumentationVariable Codebook/Data Dictionary
COI_combined_data.tab Mar 17, 2025 - Replication Data for: Characterizing Plasmodium falciparum genetic diversity and complexity of infections in clinical malaria infections in Western and Coastal Kenya using the poly-alpha microsatellite marker Tabular Data - 2.7 KB - 3 Variables, 170 Observations - UNF:6:cIvhZZ0tpAGcP66tErs/gQ== This file contains information about the COI per study participants in the two study locations
Combined_genotypes.tab Mar 17, 2025 - Replication Data for: Characterizing Plasmodium falciparum genetic diversity and complexity of infections in clinical malaria infections in Western and Coastal Kenya using the poly-alpha microsatellite marker Tabular Data - 2.2 KB - 4 Variables, 84 Observations - UNF:6:2x3xglQ7rX9EVvnFgcotRQ== This file contains information about the genotypes and their frequencies per study location

ARGs Annotation and Drug Classification.docx

Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem

MS Word - 15.9 KB -

Code

This table clssifies the genes into different drug classes and thecorresponsing resistance mechanism

Assembly of the trimmed reads using Megahit.sh

Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem

Shell Script - 1.1 KB -

Code

script showing the steps followed in assembly

Binning of the contigs using MetaBat2.sh

Apr 10, 2025 - Replication Data for: Metagenomic exploration of antimicrobial resistance genes in marine bacteria ecosystem