The bioscience department focuses on the molecular biology, epidemiology and immunology of infectious diseases with particular emphasis on the development of vaccines and understanding the transmission of pathogens. We work on malaria, viral pathogens, HIV and bacterial disease, and provide strategic direction to the Laboratory Research Platform

Our work on malaria covers the three life-cycle stages; gametocytes (where we are developing a human challenge model to test transmission blocking immunity and profiling the transmitting population in the community and developing markers of infectiousness); blood stage (where we are identifying the merozoite and red cell surface targets of human immunity and examining the role of parasite exposure on host immunity using a systems immunology approach); and pre-erythrocytic stages where we are examining vaccine-induced immunity.

Field surveillance for acute HIV infection and monitoring of a cohort and collaboration with IAVI has facilitated interests in functional assays (specifically the viral inhibition assay) and on the impact of transmitted drug resistance in Kenya.

We are undertaking work on the genomics of malaria, viral pathogens and bacterial pathogens in order to determine what the source of infection is (i.e. “who infects whom”) in collaboration with the Epidemiology and Demography Department.

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Adobe PDF - 209.4 KB - MD5: b538d3b0e32bd4c1a5f015c1d7e97605
DocumentationVariable Codebook/Data Dictionary
Stata Syntax - 11.6 KB - MD5: 80f728c48f09f8edcf4e2e1b974b16b4
CodeSTATA version 15.1
This analysis script runs the incidence analysis.
Stata Syntax - 15.4 KB - MD5: 71b52c54cbe97be22749354646127c61
CodeSTATA version 15.1
This analysis script is use to determine the risk factors associated with CUC case fatality and also do trend analysis.
Tabular Data - 1.6 MB - 107 Variables, 3590 Observations - UNF:6:3Vs8eqeNs7no04X/oysJWw==
DataSTATA version 15.1
This file contains acute non-traumatic coma cases with all the variables used in the analysis.
Tabular Data - 2.1 MB - 107 Variables, 3590 Observations - UNF:6:vmc0/RaP0D/xNJJ1S+bsWQ==
CSVData
This file contains acute non-traumatic coma cases with all the variables used in the analysis.
Plain Text - 6.1 KB - MD5: 025b46086597360d0b3772b8125a234e
DocumentationVariable Codebook/Data Dictionary
Tabular Data - 29.6 KB - 8 Variables, 360 Observations - UNF:6:zgoXe/6TFfnh5LSMyJ6dYA==
CSVData
Tabular Data - 32.9 KB - 8 Variables, 360 Observations - UNF:6:AC+9CEPgsMoemvo+xvI2bA==
DataSTATA version 15.1
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