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Replication Data for: Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals.
Jul 2, 2025
Amulele, Anne, 2025, "Replication Data for: Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals.", https://doi.org/10.7910/DVN/0XINJB, Harvard Dataverse, V1, UNF:6:Ue4qHToAWM4xphmHHC8fBA== [fileUNF]
This is a replication dataset for the manuscript titled: "Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals." This dataset comprised clinical and genome sequence data from two sources; A neonatal bacteriaemia (≤ 28 days old) study (NeoBAC) conducted in three hospitals in Nairobi, Kiambu...
Amulele et al_kpn_genseq_Codebook.pdf
Jul 2, 2025 - Replication Data for: Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals.
Adobe PDF - 141.3 KB - MD5: c679b523e17e2273798e4d0e14e0f0ae
DocumentationVariable Codebook/Data Dictionary
Amulele et al_kpn_genseq_Readme.txt
Jul 2, 2025 - Replication Data for: Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals.
Plain Text - 4.0 KB - MD5: 79c9f966a3951293f3b9ece071744325
DocumentationReadme
kpn_gensec_anon-1.tab
Jul 2, 2025 - Replication Data for: Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals.
Tabular Data - 117.8 KB - 53 Variables, 413 Observations - UNF:6:9Zt18KSsc7hKokLAjB5YpA==
csv fileData
kpn_gensec_anon.tab
Jul 2, 2025 - Replication Data for: Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals.
Tabular Data - 89.5 KB - 53 Variables, 413 Observations - UNF:6:7SjkYTr/PDW77mhOiujDmw==
DataStata (.dta)
kpn_genseq_analyse.do
Jul 2, 2025 - Replication Data for: Genomic epidemiology of sporadic and outbreak associated infant Klebsiella pneumoniae sepsis in Kenyan hospitals.
Stata Syntax - 7.6 KB - MD5: 47c044e022fa4c9955022030aa2e4612
CodeSTATA do file
Data for Neonatal Bacteraemia at level 4 county Hospitals in Kenya (NeoBAC)
May 13, 2025
Tigoi, Caroline; Ngao,Narshion; Kahindi, Eunice, 2025, "Data for Neonatal Bacteraemia at level 4 county Hospitals in Kenya (NeoBAC)", https://doi.org/10.7910/DVN/5MYMR3, Harvard Dataverse, V1, UNF:6:Xey29dft1yXeGILF2vY4eg== [fileUNF]
The NeoBAC study aimed to investigate how often bacterial blood stream infections occur in newborns, which bacteria cause them, and whether they are resistant to particular antibiotics. As part of routine clinical care, all newborn babies had a blood sample taken for culture to see if any bacteria could be grown. After the sample was taken, the bab...
AST_results_anon.tab
May 13, 2025 - Data for Neonatal Bacteraemia at level 4 county Hospitals in Kenya (NeoBAC)
Tabular Data - 230.5 KB - 59 Variables, 919 Observations - UNF:6:onsMDsil+ULIkL8dtHZpxw==
csv fileData
blood_culture_anon.tab
May 13, 2025 - Data for Neonatal Bacteraemia at level 4 county Hospitals in Kenya (NeoBAC)
Tabular Data - 778.6 KB - 15 Variables, 8560 Observations - UNF:6:08BvCj/GfP4rp8M3yUd6bw==
csv fileData
CIN Paediatric data dictionary-Neonates data.xlsx
May 13, 2025 - Data for Neonatal Bacteraemia at level 4 county Hospitals in Kenya (NeoBAC)
MS Excel Spreadsheet - 34.3 KB - MD5: a40a11475bb6d1b255a79472586919b0
DocumentationVariable Codebook/Data Dictionary
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