The Darwin Project is an initiative, based at Massachusetts Institute of Technology, to advance the development and application of novel models of marine microbes and microbial communities, identifying the relationships of individuals and communities to their environment, connecting cellular-scale processes to global microbial community structure. More details of the project can be found at http://darwinproject.mit.edu/

Part of this project includes the development of the DARWIN marine ecosystem model that is part of the MITgcm (http://mitgcm.org). Code can be downloaded from that website.

There are several version of the DARWIN model, and it continues to evolve. The purpose of this dataverse is to provide output and model code and input fields from various version of the DARWIN model.
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1 to 10 of 11 Results
Darwin3 31+16+3 (Interactions)(Massachusetts Institute of Technology)
Mar 28, 2023
This version of the model was runs with the darwin3 version of the darwin model (available at https://github.com/darwinproject/darwin3). The model resolves the cycling of carbon, phosphorus, nitrogen silica, iron, and oxygen through inorganic, living, dissolved and particulate organic phases (including CDOM). The biogeochemical and biological trace...
Darwin3 31+16+3 (Archibald)(Massachusetts Institute of Technology)
Sep 29, 2022
This version of the model was runs with the darwin3 version of the darwin model (available at https://github.com/darwinproject/darwin3). The model resolves the cycling of carbon, phosphorus, nitrogen silica, iron, and oxygen through inorganic, living, dissolved and particulate organic phases (including CDOM). The biogeochemical and biological trace...
Darwin3 31+16+3(Massachusetts Institute of Technology)
Dec 2, 2021
This version of the model was runs with the darwin3 version of the darwin model (available at https://github.com/darwinproject/darwin3). The model is based on Dutkiewicz et al (2021) and resolves the cycling of carbon, phosphorus, nitrogen silica, iron, and oxygen through inorganic, living, dissolved and particulate organic phases (including CDOM)....
Animations of Simulations(Massachusetts Institute of Technology)
Oct 22, 2021
Animations of DarwinProject simulations.
GUD IGSM(Massachusetts Institute of Technology)
Aug 9, 2021
Model output and code from a simulation of global change to 2100 for a marine ecosystem model This version of the model was runs with the gud package (https://gitlab.com/jahn/gud). The model includes the same ecosystem model and parameters as Dutkiewicz et al (2021), but here is used within a coarser physical ocean configuration that simulates a fu...
GUD Redundancy Model (Massachusetts Institute of Technology)
Dec 15, 2020
This version of the model was runs with the gud package (https://gitlab.com/jahn/gud). The model is based on Dutkiewicz et al (2020) and resolves the cycling of carbon, phosphorus, nitrogen silica, iron, and oxygen through inorganic, living, dissolved and particulate organic phases (including CDOM). The biogeochemical and biological tracers are tra...
GUD CS510/18km resolution interannual simulation(Massachusetts Institute of Technology)
Oct 24, 2019
This version of the model was runs with the gud package (git://gud.mit.edu/gud1). The model is based on Dutkiewicz et al (2015) and resolves the cycling of carbon, phosphorus, nitrogen silica, iron, and oxygen through inorganic, living, dissolved and particulate organic phases (including CDOM). The biogeochemical and biological tracers are transpor...
GUD Diversity Model(Massachusetts Institute of Technology)
Aug 7, 2019
This version of the model was runs with the gud package (git://gud.mit.edu/gud1). The model is based on Dutkiewicz et al (2015) and resolves the cycling of carbon, phosphorus, nitrogen silica, iron, and oxygen through inorganic, living, dissolved and particulate organic phases (including CDOM). The biogeochemical and biological tracers are transpor...
MONOD_RADTRANS_IGSM(Massachusetts Institute of Technology)
Dec 28, 2018
This version of the model was runs with the darwin2 packages. Ecosystem model description is available in Dutkiewicz et al. 2015. However, in this project the model is run for a climate change scenario as described in Dutkiewicz et al (2019). The model resolves the cycling of carbon, phosphorus, nitrogen silica, iron, and oxygen through inorganic,...
Interannual Simulation(Massachusetts Institute of Technology)
Jan 26, 2018MONOD_RADTRANS
SImulation 1992-2006. Output only provided for 1994-2006
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