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activate.R
Jul 11, 2023 - Replication Data for: Breastfeeding patterns are associated with human milk microbiome composition: the Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)
R Syntax - 26.5 KB - MD5: 406e38f92fbf258e7b0dff76e476c307
Required for renv package to run replicable code.
Codebook.pdf
Codebook.pdf
Jul 11, 2023 - Replication Data for: Breastfeeding patterns are associated with human milk microbiome composition: the Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)
Adobe PDF - 21.6 KB - MD5: 4d09cff5324dce8af869c9f7a22fe9b4
Codebook for variables in the metadata file.
genusdata.Rdata
Jul 11, 2023 - Replication Data for: Breastfeeding patterns are associated with human milk microbiome composition: the Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)
Gzip Archive - 7.9 KB - MD5: 82f3fd8700abb9716f39cb9707cf5ed8
Genus-level read counts per sample for human milk samples, as a phyloseq object to be opened in R.
metadata.tab
Jul 11, 2023 - Replication Data for: Breastfeeding patterns are associated with human milk microbiome composition: the Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)
Tabular Data - 6.8 KB - 18 Variables, 46 Observations - UNF:6:P+lbT8ViI+mVCXcrUKrUYg==
Sample data/metadata
renv.lock
Jul 11, 2023 - Replication Data for: Breastfeeding patterns are associated with human milk microbiome composition: the Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)
Unknown - 66.4 KB - MD5: 9dc0c4f7418fc23ff1897539b6468a6f
Use to run replication code. For more info on renv package, see https://rstudio.github.io/renv/articles/renv.html
Replication Code.Rmd
Jul 11, 2023 - Replication Data for: Breastfeeding patterns are associated with human milk microbiome composition: the Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)
R Notebook - 38.4 KB - MD5: d7646cb2a42748b671d08ed26d05ba6e
Replication code to be run in R. Use renv package to load appropriate versions of packages.
.Rprofile
Jul 11, 2023 - Replication Data for: Breastfeeding patterns are associated with human milk microbiome composition: the Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)
Unknown - 26 B - MD5: 57f9047cb06fdbef821b61f49e21406e
Required for renv package to run replicable code.
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