21 to 30 of 66 Results
Wambua, James; Munywoki, Patrick K.; Coletti,Pietro; Nyawanda, Bryan O.; Murunga, Nickson; Nokes, David James; Hens, Niel, 2022, "Replication Data for: Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya", https://doi.org/10.7910/DVN/TQ4EXK, Harvard Dataverse, V1, UNF:6:1ZeO6mLZAbLAWR2UN5Vvxg== [fileUNF]
This is a replication dataset for the manuscript titled: "Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya." |
Lambisia, Arnold W.; Mohammed, Khadija S.; Makori, Timothy O.; Ndwiga, Leonard; Mburu, Maureen W.; Moraa, Edidah O.; Mwita, John; Njeri, Jane M.; Murunga, Nickson; Musyoki, Jennifer; OCholla-Oyier, Lynette Isabella; Nokes, David James; Agoti, Charles N.; Githinji, George, 2021, "Replication Data for: Optimization of the SARS-CoV-2 ARTIC Network V4 whole genome sequencing protocol", https://doi.org/10.7910/DVN/VYPOOP, Harvard Dataverse, V2, UNF:6:A4U+YD1cFEeENj2vDysMZA== [fileUNF]
This dataset is part of genomic surveillance of SARS-CoV-2 in Kenya study. This dataset contains results of an optimisation of a whole genome sequencing protocol that contains ARTIC V4 primers using samples positive for SARS-CoV-2. Aside from the samples used for optimisation, percent genome coverage and Pango lineage classifications are also inclu... |
Rose, Erica Billig; Nyawanda,Bryan O.; Munywoki, Patrick K.; Murunga, Nickson; Bigogo, Godfrey M.; Otieno, Nancy A.; Onyango, Clayton; Chaves, Sandra S.; Verani, Jennifer R.; Emukule, Gideon O.; Widdowson, Marc-Alain; Nokes, D. James; Gerber, Susan I.; Langley, Gayle E., 2021, "Replication Data for: Respiratory Syncytial Virus Seasonality in Three Epidemiological Zones of Kenya.", https://doi.org/10.7910/DVN/3BC9JK, Harvard Dataverse, V1, UNF:6:AsnomOKgzg6zrFKjmtO+Bw== [fileUNF]
This is a replication dataset for the published article: "Respiratory Syncytial Virus Seasonality in Three Epidemiological Zones of Kenya." This data is part of a study conducted to understand RSV circulation over multiple seasons in three counties in Kenya (Nairobi, Siaya, and Kilifi) during 2006-2018. It contains the date of sample collection, mo... |
Sep 20, 2021
Agoti, Charles N., 2021, "Replication Data for: Genomic surveillance reveals the spread patterns of SARS-CoV-2 in coastal Kenya during the first two waves", https://doi.org/10.7910/DVN/4ZZYIM, Harvard Dataverse, V3, UNF:6:RL6Vg7q0JyS7YoCkjhHe1A== [fileUNF]
This is a replication dataset for the manuscript titled: "Genomic surveillance reveals the spread patterns of SARS-CoV-2 in coastal Kenya during the first two waves." |
Morobe, John M.; Kamau, Everlyn; Murunga, Nickson; Gatua, Winfred; Lewa, Clement; Cheruiyot, Robinson; Mutunga, Martin; Odundo, Calleb; Agoti, Charles N.; Nokes, David James, 2021, "Replication Data for: Trends and intensity of human rhinovirus invasions in local populations, a longitudinal analysis from Kilifi, Kenya, 2007-2018", https://doi.org/10.7910/DVN/OL399P, Harvard Dataverse, V2, UNF:6:25VkNi7AihwToeZ6rwVt0g== [fileUNF]
This is a replication dataset for the manuscript titled: "Trends and intensity of human rhinovirus invasions in local populations, a longitudinal analysis from Kilifi, Kenya, 2007-2018." This study is part of a longitudinal surveillance study established to understand the epidemiology and disease burden of HRV associated pneumonia admissions to Kil... |
Agoti, Charles N.; Githinji, George; Mohammed, Khadija S.; Lambisia, Arnold W.; De Laurent, Zaydah R.; Morobe, John M.; Mburu, Maureen W.; Ong'era, Edidah M.; Otieno, Edward; Azali, Hamza Abdou; Abdallah, Kamal Said; Diarra, Abdoulaye; Yahaya, Ali Ahmed; Athanasius, Dratibi Fred; Moeletsi, Nicksy Gumede; Tsofa, Benjamin; Bejon, Philip; Borus, Peter; Nokes, David James; Ochola-Oyier, Isabella, 2021, "Replication Data for: Detection of SARS-CoV-2 variant 501Y.V2 in Comoros Islands in January 2021", https://doi.org/10.7910/DVN/NDOIQ2, Harvard Dataverse, V2, UNF:6:fbZB4rfcSnOpndHaOqL4UA== [fileUNF]
This a replication dataset for the manuscript titled: "Detection of SARS-CoV-2 variant 501Y.V2 in Comoros Islands in January 2021." This dataset is part of the continuous genomic surveillance of SARS-CoV-2 courtesy of the Laboratory Sequencing Network created by WHO-AFRO and AFRICA-CDC. This dataset contains results of samples positive for SARS-CoV... |
Luka, Martha M.; Kamau, Everlyn; de Laurent, Zaydah R.; Morobe, John M.; Alii, Leonard K.; Nokes, David James; Agoti, Charles N., 2021, "Replication Data for: Whole genome sequencing of two human rhinovirus A types (A101 and A15) detected in Kenya, 2016-2018", https://doi.org/10.7910/DVN/QGXZLI, Harvard Dataverse, V1, UNF:6:sHiQY2P6RU/NhRKOoAUfXw== [fileUNF]
This is a replication dataset for the manuscript titled: "Whole genome sequencing of two human rhinovirus A types (A101 and A15) detected in Kenya, 2016-2018." The dataset contains contains Cycle threshold (Ct) values, and read/sequencing depth. The related study utilized nasopharyngeal swabs collected during two previous studies in Kilifi County,... |
Waweru, Jacqueline W.; de Laurent, Zaydah; Kamau, Everlyn; Said, Khadija; Gicheru, Elijah; Mutunga, Martin; Kibet, Caleb; Kinyua, Johnson; Nokes, David James; Sande, Charles; Githinji, George, 2021, "Replication Data for: Enrichment approach for unbiased sequencing of respiratory syncytial virus directly from clinical samples", https://doi.org/10.7910/DVN/28LOAI, Harvard Dataverse, V3
This is a replication dataset for the manuscript titled: "Enrichment approach for unbiased sequencing of respiratory syncytial virus directly from clinical samples." The data contains the results obtained after optimizing a metagenomics sequencing protocol for respiratory viruses with the main virus of interest being the respiratory syncytial virus... |
Agoti, Charles N.; Curran, Martin; Murunga, Nickson; Ngari, Moses; Muthumbi, Esther; Lambisia, Arnold W.; Frost, Simon D.W.; Bejon,Philip; Blacklaws, Barbara; Nokes, David James; Drumright, Lydia, 2021, "Replication Data for: Differences in epidemiology of enteropathogens in children pre- and post-rotavirus vaccine introduction in Kilifi, coastal Kenya", https://doi.org/10.7910/DVN/VBCUV3, Harvard Dataverse, V1, UNF:6:JbeV79dI6Mah1hWi57Jw6Q== [fileUNF]
This is a replication dataset for the manuscript titled: "Differences in epidemiology of enteropathogens in children pre- and post-rotavirus vaccine introduction in Kilifi, coastal Kenya. The dataset is part of long-term surveillance of enteric viruses associated with diarrhea among children under 13 years admitted to the KCH study. It contains res... |
Lambisia, Arnold W.; Phan, My V. T.; de Laurent, Zaydah R.; Cotten, Matthew; Nokes, David James; Agoti, Charles N., 2021, "Replication Data for: Near complete genomes of eight human astroviruses recovered from diarrheal stool samples of hospitalized children in coastal Kenya in 2019", https://doi.org/10.7910/DVN/VU11AJ, Harvard Dataverse, V1, UNF:6:xnvilHsw7YepIDqFDT/WGw== [fileUNF]
This is a replication dataset for the publication: "Near complete genomes of eight human astroviruses recovered from diarrheal stool samples of hospitalized children in coastal Kenya in 2019. The dataset is part of long-term surveillance of enteric viruses associated with diarrhea among children under 13 years admitted to the KCH study. This datase... |
