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Replication Data for: Emergence and transmission dynamics of the FY.4 Omicron Subvariant
Apr 3, 2025
Musundi, Sebastian, 2024, "Replication Data for: Emergence and transmission dynamics of the FY.4 Omicron Subvariant", https://doi.org/10.7910/DVN/VPWUXN, Harvard Dataverse, V2
This is a replication dataset for the manuscript titled: "Emergence and transmission dynamics of the FY.4 Omicron Subvariant ". SARS-CoV-2 FY.4 sequences previously sequenced from KEMRI-Wellcome Trust Research Programme were retrieved together with other FY.4 global sequences sourced from Global Initiative on Sharing All Influenza Data (GISAID).Phy...
Data.zip
Apr 3, 2025 - Replication Data for: Emergence and transmission dynamics of the FY.4 Omicron Subvariant
ZIP Archive - 17.9 MB - MD5: 940a01e8ce1ead22771a6e4ed2b240ad
Data
READme.txt
Apr 3, 2025 - Replication Data for: Emergence and transmission dynamics of the FY.4 Omicron Subvariant
Plain Text - 5.2 KB - MD5: 7bff8f0407e244abc0c57e808b4688d7
DocumentationReadme
Script.zip
Apr 3, 2025 - Replication Data for: Emergence and transmission dynamics of the FY.4 Omicron Subvariant
ZIP Archive - 15.6 KB - MD5: a634e724926047eaec80dea6b4a5d7b5
Code
Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24
Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24
Jan 22, 2025
Lambisia, Arnold W.; Katama, Esther N.; Ochola-Oyier, Isabella; Agoti, Charles N., 2025, "Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24", https://doi.org/10.7910/DVN/BMCJTI, Harvard Dataverse, V1, UNF:6:+Fycv3F2m7MyWKQZrmgbBw== [fileUNF]
This is a replication dataset for the manuscript titled: "Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24." The datasets are part of ongoing SARS-CoV-2 surveillance either in the outpatient, inpatient and community within the KHDSS in coastal Kenya. Dataset1 shows the temporal distribution o...
Data1.tab
Jan 22, 2025 - Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24
Tabular Data - 2.2 KB - 6 Variables, 70 Observations - UNF:6:1U6f60FeCsKSdtry5rQlyw==
csv fileData
Data2_v2.tab
Jan 22, 2025 - Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24
Tabular Data - 41.2 KB - 25 Variables, 247 Observations - UNF:6:ji0e+r04uRgUUoEKTTc2eA==
csv fileData
Fig1.R
Jan 22, 2025 - Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24
R Syntax - 5.5 KB - MD5: 175667c027a9b03860ac9b39981aa332
CodeR script
Lambisia_SARS_CoV_2_codebook.pdf
Lambisia_SARS_CoV_2_codebook.pdf
Jan 22, 2025 - Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24
Adobe PDF - 128.9 KB - MD5: c89a90f35f90556d7161d34600e710fb
DocumentationVariable Codebook/Data Dictionary
Lambisia_SARS_CoV_2_Readme.txt
Jan 22, 2025 - Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24
Plain Text - 4.8 KB - MD5: f71ab9cd928c4d5abd7c3e48fab963e5
DocumentationReadme
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