Virus Epidemiology and Control (VEC) Dataverse

Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

11 to 20 of 598 Results

Tables_Figures.Rmd Jan 22, 2025 - Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24 R Notebook - 9.3 KB - MD5: fc5b1787b17ea4bcf26bd14bdafc99f5 CodeR script
Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. Aug 7, 2024 Morobe, John M.; Kamau, Everlyn; Luka, Martha M.; Murunga, Nickson; Lewa, Clement; Mutunga, Martin; Bigogo, Godfrey; Nyawanda, Brian; Onyango, Clayton; Nokes, David James; Agoti, Charles N.; Munywoki, Patrick K., 2024, "Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014.", https://doi.org/10.7910/DVN/CBHVTA, Harvard Dataverse, V2, UNF:6:sQTYC5N6hrmEF7vFz/tsTQ== [fileUNF] This is a replication dataset for the manuscript titled: "Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014". The dataset comprises demographic and clinical details of patients with acute respiratory illness across different age groups. Data collection spanned from January to December 2014 across three h...
Appendix Table 1.csv Aug 7, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. Comma Separated Values - 116.4 KB - MD5: 4d0565430d63d0a7a2a57e1686ee0635 Appendix Table 1Data
JMwita_ Temporal_Distribution_Rhinovirus_data_codebook_v2.pdf Aug 7, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. Adobe PDF - 203.8 KB - MD5: 6dc13d581fa688a7796d9cf01b73f913 DocumentationVariable Codebook/Data Dictionary
Fig3_SPRED-K_metadata_anon.tab Apr 2, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. Tabular Data - 30.5 KB - 5 Variables, 798 Observations - UNF:6:L+HN3toSdVW5rxAtxGu4Bw== csvData This data file contains list of all the sample sequenced per site and rhinovirus type detected
Fig3_SPReD-K_temporal_plots_27032024.R Apr 2, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. R Syntax - 29.5 KB - MD5: 31d1ac681ab8548843cd776875b55d96 CodeR script This r code plots the temporal distribution of all the rhinovirus species in Kenya/site
Fig4_SPPeD-K_Tree_updated.R Apr 2, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. R Syntax - 36.6 KB - MD5: 4cd99588b878bd76ac6ea539c395ec6c CodeR script This r code plots the time-resolved phylogenetic tree of the prevalent rhinovirus types in Kenya
Fig4_SPReD_Kenya_global.tab Apr 2, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. Tabular Data - 407.5 KB - 8 Variables, 5251 Observations - UNF:6:Q3wP4+MPg0c9ar5pZ/DfPA== csvData This data file contains the list of all the sample sequenced per site as well as alist global sequenced obtained from Genbank.
JMwita_ Temporal_Distribution_Rhinovirus_data_Readme.txt Apr 2, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. Plain Text - 4.3 KB - MD5: 2d67d4594e708a7fe1e25586df2a4c0e DocumentationReadme
Suppfig1_prop_species_site.R Apr 2, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014. R Syntax - 2.0 KB - MD5: 7c3b64b0713105c93bcea68d62e7bbcd CodeR script This r code plots the temporal distribution of all the rhinovirus types in Kenya.

Tables_Figures.Rmd

Jan 22, 2025 - Replication Data for: Epidemiological insights from genomic analyses of the SARS-CoV-2 infection wave in coastal Kenya, 2023-24

R Notebook - 9.3 KB -

CodeR script

Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014.

Aug 7, 2024

Morobe, John M.; Kamau, Everlyn; Luka, Martha M.; Murunga, Nickson; Lewa, Clement; Mutunga, Martin; Bigogo, Godfrey; Nyawanda, Brian; Onyango, Clayton; Nokes, David James; Agoti, Charles N.; Munywoki, Patrick K., 2024, "Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014.", https://doi.org/10.7910/DVN/CBHVTA, Harvard Dataverse, V2, UNF:6:sQTYC5N6hrmEF7vFz/tsTQ== [fileUNF]

This is a replication dataset for the manuscript titled: "Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014". The dataset comprises demographic and clinical details of patients with acute respiratory illness across different age groups. Data collection spanned from January to December 2014 across three h...

Appendix Table 1.csv

Aug 7, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014.

Comma Separated Values - 116.4 KB -

Appendix Table 1Data

JMwita_ Temporal_Distribution_Rhinovirus_data_codebook_v2.pdf

Aug 7, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014.

Adobe PDF - 203.8 KB -

DocumentationVariable Codebook/Data Dictionary

Fig3_SPRED-K_metadata_anon.tab

Apr 2, 2024 - Replication Data for: Temporal distribution of rhinovirus types in multiple regions across Kenya over one year, 2014.

Tabular Data - 30.5 KB - 5 Variables, 798 Observations -

csvData