1 to 8 of 8 Results
Feb 15, 2024
Giri, Nabin; Wang, Liguo; Cheng, Jianlin, 2023, "Cryo2StructData Metadata", https://doi.org/10.7910/DVN/JMN60H, Harvard Dataverse, V3
An Excel sheet named as metadata.xlsx contains the relevant information for each cryo-EM density map present in Cryo2StructData dataset. Specifically, each row of the sheet contains the EMD ID of the density map, it's corresponding PDB code, density map's resolution, structure determination method, the software used to determine the density map, th... |
Nov 4, 2023 - Cryo2StructData : Full
Giri, Nabin; Wang, Liguo; Cheng, Jianlin, 2023, "Cryo2StructData : Full Dataset", https://doi.org/10.7910/DVN/FCDG0W, Harvard Dataverse, V2
This repository contains the complete Cryo2StructData dataset, which encompasses 7,392 density maps. The data are organized based on EMD-IDs. |
Oct 26, 2023
Giri, Nabin; Wang, Liguo; Cheng, Jianlin, 2023, "Cryo2StructData : Test Dataset", https://doi.org/10.7910/DVN/2GSSC9, Harvard Dataverse, V1
This repository contains the Cryo2StructData test dataset, incorporating a collection of 390 density maps. These density maps are intended for the purpose of testing AI-based models, providing valuable resources for the evaluation of their performance. |
Oct 26, 2023 - Cryo2StructData : Small Subset
Giri, Nabin; Wang, Liguo; Cheng, Jianlin, 2023, "Cryo2StructData : Small Subsample Dataset", https://doi.org/10.7910/DVN/CGUENL, Harvard Dataverse, V1
This repository comprises the smaller subset of Cryo2StructData. From the full Cryo2StructData dataset, we extracted a reduced subset consisting of 1867 curated density maps, representing 25% of the original Cryo2StructData collection. |
Oct 26, 2023 - Cryo2StructData : Small Subset
Giri, Nabin; Wang, Liguo; Cheng, Jianlin, 2023, "Cryo2StructData : Trained Model and Data Splits (Small Subset)", https://doi.org/10.7910/DVN/DTV4JF, Harvard Dataverse, V1
This repository includes the trained transformer-based model for the small subset Cryo2StructData dataset, as well as the training and validation split files. These split files categorize density map EMD-IDs into low, medium, and high resolutions. The training and validation sets contain 1680 and 187 density maps, respectively, with a split ratio o... |
Oct 26, 2023
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Oct 26, 2023 - Cryo2StructData : Full
Giri, Nabin; Wang, Liguo; Cheng, Jianlin, 2023, "Cryo2StructData : Trained Model and Data Splits (Full)", https://doi.org/10.7910/DVN/SXNYRE, Harvard Dataverse, V1
This repository includes the trained transformer-based model for the full Cryo2StructData dataset, as well as the training and validation split files. These split files categorize density map EMD-IDs into low, medium, and high resolutions. The dataset is divided into two subsets: a training dataset containing 6,652 maps and a validation dataset con... |
Oct 26, 2023
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