Cannon MCD Dataverse

This dataverse contains data regarding the spatial statistical analysis of glomerular IgG deposits in membranous glomerulopathy and minimal change disease.

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Replication Data for: mgn_vs_mcd_extracted_puncta_and_non_puncta_space Jan 4, 2025 Cannon, Andrew, 2025, "Replication Data for: mgn_vs_mcd_extracted_puncta_and_non_puncta_space", https://doi.org/10.7910/DVN/NMJDRR, Harvard Dataverse, V1, UNF:6:mDlyWHhxxLr7ezbqfPzR6Q== [fileUNF] This data is the raw data extracted from pixel classification performed in qupath for characterization of spatial distribution of IgG-stained puncta in Minimal Change Disease and Membranous Nephorpathy.
Replication Data for: glomerulus_tiles Jan 4, 2025 Cannon, Andrew, 2025, "Replication Data for: glomerulus_tiles", https://doi.org/10.7910/DVN/EYXG3G, Harvard Dataverse, V1, UNF:6:zz8D6EDhbeBihAQMU4VEQA== [fileUNF] This data contains the coordinates of a series of 100-pixel square tiles that overlay the glomeruli of cases of membranous nephropathy and minimal change disease. These tiles can be used to approximate the space and shape and 2-dimensional coordinates within each glomerulus that is composed of tissue as opposed to vascular and Bowmans space. Effect...
Replication Code for: MGN_MCD_spatial_point_pattern_analysis Jan 4, 2025 Cannon, Andrew, 2025, "Replication Code for: MGN_MCD_spatial_point_pattern_analysis", https://doi.org/10.7910/DVN/8ONLOB, Harvard Dataverse, V1 This document contains the modified code blocks used for analysis of the spatial point patterns of IgG-stained puncta in glomeruli of patients with MGN and MCD. The code is not intended to be run as a pipeline and will require some degree of modification when run in an environment different than the one in which it was written. Several components o...

Replication Data for: mgn_vs_mcd_extracted_puncta_and_non_puncta_space

Jan 4, 2025

Cannon, Andrew, 2025, "Replication Data for: mgn_vs_mcd_extracted_puncta_and_non_puncta_space", https://doi.org/10.7910/DVN/NMJDRR, Harvard Dataverse, V1, UNF:6:mDlyWHhxxLr7ezbqfPzR6Q== [fileUNF]

This data is the raw data extracted from pixel classification performed in qupath for characterization of spatial distribution of IgG-stained puncta in Minimal Change Disease and Membranous Nephorpathy.

Replication Data for: glomerulus_tiles

Jan 4, 2025

Cannon, Andrew, 2025, "Replication Data for: glomerulus_tiles", https://doi.org/10.7910/DVN/EYXG3G, Harvard Dataverse, V1, UNF:6:zz8D6EDhbeBihAQMU4VEQA== [fileUNF]

This data contains the coordinates of a series of 100-pixel square tiles that overlay the glomeruli of cases of membranous nephropathy and minimal change disease. These tiles can be used to approximate the space and shape and 2-dimensional coordinates within each glomerulus that is composed of tissue as opposed to vascular and Bowmans space. Effect...

Replication Code for: MGN_MCD_spatial_point_pattern_analysis

Jan 4, 2025

Cannon, Andrew, 2025, "Replication Code for: MGN_MCD_spatial_point_pattern_analysis", https://doi.org/10.7910/DVN/8ONLOB, Harvard Dataverse, V1

This document contains the modified code blocks used for analysis of the spatial point patterns of IgG-stained puncta in glomeruli of patients with MGN and MCD. The code is not intended to be run as a pipeline and will require some degree of modification when run in an environment different than the one in which it was written. Several components o...

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