Coronavirus (COVID-19) Data

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1 to 6 of 6 Results

An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams Feb 17, 2022 - KEMRI-Wellcome Trust Dataverse Mohammed, Khadija Said; de Laurent, Zaydah R.; Omuoyo, Donwilliams O.; Lewa, Clement; Gicheru, Elijah; Cheruiyot, Robinson; Bartilol, Brian; Mutua, Shadrack; Musyoki, Jennifer; Gumba, Horace; Mwacharo, Jedidah; Riako, Debra; Mwangi, Shaban; Gichuki, Bonface M.; Nyamako, Lydia; Karani, Angela; Karanja, Henry; Mugo, Daisy; Gitonga, John N.; Njuguna, Susan; Gumbi, Wilson; Tawa, Brian; Tendwa, Metrine; Cheruiyot, Wesley; Sein, Yiakon; Nyambu, John K.; Patta, Shem O.; Thani, Thani Suleiman; Maitha, Eric K.; Kitole, Benson; Mwakinangu, Mohamed S.; Muslih, Barke S.; Otieno, John Ochieng; Nyiro, Joyce U.; Kiyuka, Patience; Ndwiga, Leonard M.; Wamae, Kevin; Kimani, Domtila; Makale, Johnstone; Morobe, John Mwita; Osoti, Victor; Lambisia, Arnold W.; Odundo, Calleb; Mwarumba, Salim; Mutunga, Martin; Bejon, Philip; Tsofa, Benjamin; Agoti, Charles N.; Ochola-Oyier, Lynette Isabella, 2020, "An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams", https://doi.org/10.7910/DVN/WPZHQR, Harvard Dataverse, V2 qRT-PCR replication dataset generated from the optimisation of four assays for SARS-CoV-2 diagnosis
Replication Data for: Epidemiology of COVID-19 infections on routine PCR and serology testing in Coastal Kenya Feb 15, 2022 Nyagwange, James; Ndwiga, Leonard; Muteru, Kelvin; Wamae, Kevin; Tuju, James; COVID testing team; Kutima, Bernadette; Gitonga, John; Karanja, Henry; Mugo, Daisy; Kasera, Kadondi; Amoth, Patrick; Murunga, Nickson; Babu, Lawrence; Otieno, Edward; Githinji, George; Nokes, James; Tsofa, Benjamin; Orindi, Benedict; Barasa, Edwine; Warimwe, George; Agoti, Charles N.; Bejon, Philip; Ochola-Oyier, Lynette Isabella, 2022, "Replication Data for: Epidemiology of COVID-19 infections on routine PCR and serology testing in Coastal Kenya", https://doi.org/10.7910/DVN/BF3BEF, Harvard Dataverse, V3, UNF:6:1VUXWjqkW+CfajVT4hCf9Q== [fileUNF] Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection began in Wuhan, China in December 2019 and rapidly spread around the world causing a disease called the Corona virus disease 2019 (COVID-19). The first case of COVID-19 was detected in the Kenyan Coast in 21st March 2020. Since then KEMRI-Wellcome Trust Research Programme has be...
Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data Mar 15, 2021 - Virus Epidemiology and Control (VEC) Dataverse Ojal, John; Brand, Samuel P. C.; Were, Vincent; Okiro, Emelda A.; Kombe, Ivy K.; Mburu, Caroline; Aziza, Rabia; Ogero, Morris; Agweyu, Ambrose; Warimwe, George M.; Uyoga, Sophie; Adetifa, Ifedayo M. O.; Scott, J. Anthony G.; Otieno, Edward; Ochola-Oyier, Lynette Isabella; Agoti, Charles N.; Kasera, Kadondi; Amoth, Patrick; Mwangangi, Mercy; Aman, Rashid; Ng’ang’a, Wangari; Tsofa, Benjamin; Bejon, Philip; Barasa, Edwine; Keeling, Matt. J.; Nokes, David James, 2020, "Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data", https://doi.org/10.7910/DVN/RXAIPS, Harvard Dataverse, V2, UNF:6:zpkOX7HPsfYNae1dhR7xqQ== [fileUNF] This is a replication dataset for the submitted manuscript "Ojal, J., Brand, S.P., Were, V., Okiro, E.A., Kombe, I.K., Mburu, C., Aziza, R., Ogero, M., Agweyu, A., Warimwe, G.M. and Uyoga, S., 2020. Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data. medRxiv.". The related study was conducted to estimate t...
Replication Data for: Temporal trends of SARS-CoV-2 seroprevalence in transfusion blood donors during the first wave of the COVID-19 epidemic in Kenya Feb 8, 2021 - Invasive Bacterial Disease Research Group Dataverse Adetifa, Ifedayo M.O.; Uyoga, Sophie; Gitonga, John N.; Otiende, Mark; Nyagwange, James; Karanja, Henry K.; Tuju, James; Wanjiku, Perpetual; Aman, Rashid; Mwangangi, Mercy; Amoth, Patrick; Kasera, Kadondi; Ng’ang’a, Wangari; Rombo, Charles; Yegon, Christine; Kithi, Khamisi; Odhiambo, Elizabeth; Rotich, Thomas; Orgut, Irene; Kihara, Sammy; Bottomley, Christian; Kagucia, Eunice W.; Gallagher, Katherine E.; Etyang, Anthony; Voller, Shirine; Lambe, Teresa; Wright, Daniel; Barasa, Edwine; Tsofa, Benjamin; Bejon, Philip; Ochola-Oyier, Lynette I.; Agweyu, Ambrose; Scott, J. Anthony G.; Warimwe, George M., 2021, "Replication Data for: Temporal trends of SARS-CoV-2 seroprevalence in transfusion blood donors during the first wave of the COVID-19 epidemic in Kenya", https://doi.org/10.7910/DVN/FQUNVD, Harvard Dataverse, V1, UNF:6:ItlGSwhwfrDEH/48aUySlA== [fileUNF] This is a replication dataset for the manuscriot titled: "Temporal trends of SARS-CoV-2 seroprevalence in transfusion blood donors during the first wave of the COVID-19 epidemic in Kenya". These data contain anonymised residual donor serum samples used for screening of transfusion transmissible infections were collected at the KNBTS regional centre...
Replication Data for: Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Kenyan blood donors Dec 15, 2020 - Human Genetic Factors (HGF) Group Uyoga, Sophie; Adetifa, Ifedayo M.O.; Karanja, Henry K.; Nyagwange, James; Tuju, James; Wanjiku, Perpetual; Aman, Rashid; Mwangangi, Mercy; Amoth, Patrick; Kasera, Kadondi; Ng'ang'a, Wangari; Rombo, Charles; Yegon, Christine K.; Kithi, Khamisi; Odhiambo, Elizabeth; Rotich, Thomas; Orgut, Irene; Kihara, Sammy; Otiende, Mark; Bottomley, Christian; Mupe, Zonia N.; Kagucia, Eunice W.; Gallagher, Katherine; Etyang, Anthony; Voller, Shirine; Gitonga, John; Mugo, Daisy; Agoti, Charles N.; Otieno, Edward; Ndwiga, Leonard; Lambe, Teresa; Wright, Daniel; Barasa, Edwine; Tsofa, Benjamin; Bejon, Philip; Ochola-Oyier, Lynette I.; Agweyu, Ambrose; Scott, J. Anthony G.; Warimwe, George, 2020, "Replication Data for: Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Kenyan blood donors", https://doi.org/10.7910/DVN/RENVC9, Harvard Dataverse, V2, UNF:6:wz+c4fQYZHsygylwNsZ2zQ== [fileUNF] These data contain anonymised residual donor serum samples used for screening of transfusion transmissible infections were collected at the KNBTS regional centres in 4 sites (Mombasa, Nairobi, Eldoret and Kisumu) which has been used to compute standardised prevalence by age, sex and region using KNBS population as the standard population.
Replication Data for: Pooled testing conserves SARS-CoV-2 laboratory resources and improves turn-around time: experience at KEMRI-Wellcome Trust Programme, Kenya Jul 25, 2020 Agoti, Charles N., 2020, "Replication Data for: Pooled testing conserves SARS-CoV-2 laboratory resources and improves turn-around time: experience at KEMRI-Wellcome Trust Programme, Kenya", https://doi.org/10.7910/DVN/I4XUC5, Harvard Dataverse, V1 These data is part of the nationwide testing of SARS-CoV-2 at the KEMRI-Wellcome Trust Programme, Kenya. It contains results of specimens collected between in June 2020 which were processed and screened for SARS-COV-2 using real-time polymerase chain reaction (RT-PCR). Aside from that, it also contains the quantification cycle (Ct) values for both...

An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams

Feb 17, 2022 - KEMRI-Wellcome Trust Dataverse

Mohammed, Khadija Said; de Laurent, Zaydah R.; Omuoyo, Donwilliams O.; Lewa, Clement; Gicheru, Elijah; Cheruiyot, Robinson; Bartilol, Brian; Mutua, Shadrack; Musyoki, Jennifer; Gumba, Horace; Mwacharo, Jedidah; Riako, Debra; Mwangi, Shaban; Gichuki, Bonface M.; Nyamako, Lydia; Karani, Angela; Karanja, Henry; Mugo, Daisy; Gitonga, John N.; Njuguna, Susan; Gumbi, Wilson; Tawa, Brian; Tendwa, Metrine; Cheruiyot, Wesley; Sein, Yiakon; Nyambu, John K.; Patta, Shem O.; Thani, Thani Suleiman; Maitha, Eric K.; Kitole, Benson; Mwakinangu, Mohamed S.; Muslih, Barke S.; Otieno, John Ochieng; Nyiro, Joyce U.; Kiyuka, Patience; Ndwiga, Leonard M.; Wamae, Kevin; Kimani, Domtila; Makale, Johnstone; Morobe, John Mwita; Osoti, Victor; Lambisia, Arnold W.; Odundo, Calleb; Mwarumba, Salim; Mutunga, Martin; Bejon, Philip; Tsofa, Benjamin; Agoti, Charles N.; Ochola-Oyier, Lynette Isabella, 2020, "An optimisation of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams", https://doi.org/10.7910/DVN/WPZHQR, Harvard Dataverse, V2

qRT-PCR replication dataset generated from the optimisation of four assays for SARS-CoV-2 diagnosis

Replication Data for: Epidemiology of COVID-19 infections on routine PCR and serology testing in Coastal Kenya

Feb 15, 2022

Nyagwange, James; Ndwiga, Leonard; Muteru, Kelvin; Wamae, Kevin; Tuju, James; COVID testing team; Kutima, Bernadette; Gitonga, John; Karanja, Henry; Mugo, Daisy; Kasera, Kadondi; Amoth, Patrick; Murunga, Nickson; Babu, Lawrence; Otieno, Edward; Githinji, George; Nokes, James; Tsofa, Benjamin; Orindi, Benedict; Barasa, Edwine; Warimwe, George; Agoti, Charles N.; Bejon, Philip; Ochola-Oyier, Lynette Isabella, 2022, "Replication Data for: Epidemiology of COVID-19 infections on routine PCR and serology testing in Coastal Kenya", https://doi.org/10.7910/DVN/BF3BEF, Harvard Dataverse, V3, UNF:6:1VUXWjqkW+CfajVT4hCf9Q== [fileUNF]

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection began in Wuhan, China in December 2019 and rapidly spread around the world causing a disease called the Corona virus disease 2019 (COVID-19). The first case of COVID-19 was detected in the Kenyan Coast in 21st March 2020. Since then KEMRI-Wellcome Trust Research Programme has be...

Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data

Mar 15, 2021 - Virus Epidemiology and Control (VEC) Dataverse

Ojal, John; Brand, Samuel P. C.; Were, Vincent; Okiro, Emelda A.; Kombe, Ivy K.; Mburu, Caroline; Aziza, Rabia; Ogero, Morris; Agweyu, Ambrose; Warimwe, George M.; Uyoga, Sophie; Adetifa, Ifedayo M. O.; Scott, J. Anthony G.; Otieno, Edward; Ochola-Oyier, Lynette Isabella; Agoti, Charles N.; Kasera, Kadondi; Amoth, Patrick; Mwangangi, Mercy; Aman, Rashid; Ng’ang’a, Wangari; Tsofa, Benjamin; Bejon, Philip; Barasa, Edwine; Keeling, Matt. J.; Nokes, David James, 2020, "Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data", https://doi.org/10.7910/DVN/RXAIPS, Harvard Dataverse, V2, UNF:6:zpkOX7HPsfYNae1dhR7xqQ== [fileUNF]

This is a replication dataset for the submitted manuscript "Ojal, J., Brand, S.P., Were, V., Okiro, E.A., Kombe, I.K., Mburu, C., Aziza, R., Ogero, M., Agweyu, A., Warimwe, G.M. and Uyoga, S., 2020. Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data. medRxiv.". The related study was conducted to estimate t...

Replication Data for: Temporal trends of SARS-CoV-2 seroprevalence in transfusion blood donors during the first wave of the COVID-19 epidemic in Kenya

Feb 8, 2021 - Invasive Bacterial Disease Research Group Dataverse

Adetifa, Ifedayo M.O.; Uyoga, Sophie; Gitonga, John N.; Otiende, Mark; Nyagwange, James; Karanja, Henry K.; Tuju, James; Wanjiku, Perpetual; Aman, Rashid; Mwangangi, Mercy; Amoth, Patrick; Kasera, Kadondi; Ng’ang’a, Wangari; Rombo, Charles; Yegon, Christine; Kithi, Khamisi; Odhiambo, Elizabeth; Rotich, Thomas; Orgut, Irene; Kihara, Sammy; Bottomley, Christian; Kagucia, Eunice W.; Gallagher, Katherine E.; Etyang, Anthony; Voller, Shirine; Lambe, Teresa; Wright, Daniel; Barasa, Edwine; Tsofa, Benjamin; Bejon, Philip; Ochola-Oyier, Lynette I.; Agweyu, Ambrose; Scott, J. Anthony G.; Warimwe, George M., 2021, "Replication Data for: Temporal trends of SARS-CoV-2 seroprevalence in transfusion blood donors during the first wave of the COVID-19 epidemic in Kenya", https://doi.org/10.7910/DVN/FQUNVD, Harvard Dataverse, V1, UNF:6:ItlGSwhwfrDEH/48aUySlA== [fileUNF]

This is a replication dataset for the manuscriot titled: "Temporal trends of SARS-CoV-2 seroprevalence in transfusion blood donors during the first wave of the COVID-19 epidemic in Kenya". These data contain anonymised residual donor serum samples used for screening of transfusion transmissible infections were collected at the KNBTS regional centre...

Replication Data for: Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Kenyan blood donors

Dec 15, 2020 - Human Genetic Factors (HGF) Group

Uyoga, Sophie; Adetifa, Ifedayo M.O.; Karanja, Henry K.; Nyagwange, James; Tuju, James; Wanjiku, Perpetual; Aman, Rashid; Mwangangi, Mercy; Amoth, Patrick; Kasera, Kadondi; Ng'ang'a, Wangari; Rombo, Charles; Yegon, Christine K.; Kithi, Khamisi; Odhiambo, Elizabeth; Rotich, Thomas; Orgut, Irene; Kihara, Sammy; Otiende, Mark; Bottomley, Christian; Mupe, Zonia N.; Kagucia, Eunice W.; Gallagher, Katherine; Etyang, Anthony; Voller, Shirine; Gitonga, John; Mugo, Daisy; Agoti, Charles N.; Otieno, Edward; Ndwiga, Leonard; Lambe, Teresa; Wright, Daniel; Barasa, Edwine; Tsofa, Benjamin; Bejon, Philip; Ochola-Oyier, Lynette I.; Agweyu, Ambrose; Scott, J. Anthony G.; Warimwe, George, 2020, "Replication Data for: Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Kenyan blood donors", https://doi.org/10.7910/DVN/RENVC9, Harvard Dataverse, V2, UNF:6:wz+c4fQYZHsygylwNsZ2zQ== [fileUNF]

These data contain anonymised residual donor serum samples used for screening of transfusion transmissible infections were collected at the KNBTS regional centres in 4 sites (Mombasa, Nairobi, Eldoret and Kisumu) which has been used to compute standardised prevalence by age, sex and region using KNBS population as the standard population.

Replication Data for: Pooled testing conserves SARS-CoV-2 laboratory resources and improves turn-around time: experience at KEMRI-Wellcome Trust Programme, Kenya

Jul 25, 2020

Agoti, Charles N., 2020, "Replication Data for: Pooled testing conserves SARS-CoV-2 laboratory resources and improves turn-around time: experience at KEMRI-Wellcome Trust Programme, Kenya", https://doi.org/10.7910/DVN/I4XUC5, Harvard Dataverse, V1

These data is part of the nationwide testing of SARS-CoV-2 at the KEMRI-Wellcome Trust Programme, Kenya. It contains results of specimens collected between in June 2020 which were processed and screened for SARS-COV-2 using real-time polymerase chain reaction (RT-PCR). Aside from that, it also contains the quantification cycle (Ct) values for both...

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