The MicroMap dataverse contains the data created for the publication TBD. The MicroMap is a manually curated microbiome metabolic network visualisation derived from the AGORA2 resource of genome-scale metabolic reconstructions, encompassing 7,302 microbes. The MicroMap contains 5,064 unique reactions and 3,499 unique metabolites, including for 98 drugs. The MicroMap allows users to intuitively explore microbiome metabolism, inspect microbial metabolic capabilities, and visualise computational modelling results.
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MicroMap.pdf
Dec 4, 2024 - MicroMap - CellDesigner xml and pdf formats
Adobe PDF - 20.6 MB - MD5: 8ff0a18f9aadc50834d913ef4552b185
MicroMap.xml
Dec 4, 2024 - MicroMap - CellDesigner xml and pdf formats
XML - 32.1 MB - MD5: b7ea02c2430fb8b809af889fd6fadae9
AGORA2byClass.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 class visualisations
Gzip Archive - 61.8 MB - MD5: 8f19c7b7b849b917452512fdcf8525da
AGORA2byOrder.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 order visualisations
Gzip Archive - 123.5 MB - MD5: 4fe36e355f1cca04459c629c33dff136
AGORA2byFamily.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 family visualisations
Gzip Archive - 240.8 MB - MD5: d51543dd75ceb9d7b7a7cbe8cd65b400
AGORA2byGenus.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 genus visualisations
Gzip Archive - 668.0 MB - MD5: 1f5cf131dbbd5c90a19d5f810ba56b7b
AGORA2bySpecies_1.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 species visualisations
Gzip Archive - 1.5 GB - MD5: 342e2fdb357f6abe230e2a704b5713c8
AGORA2bySpecies_2.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 species visualisations
Gzip Archive - 1.2 GB - MD5: 1a037fae00efa2c79f22582264de4524
AGORA2byStrain_1.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 strain visualisations
Gzip Archive - 1.5 GB - MD5: 51d62b560ac049e58d5d9f41162e5fc8
AGORA2byStrain_2.tar.gz
Dec 4, 2024 - MicroMap - AGORA2 strain visualisations
Gzip Archive - 1.5 GB - MD5: 420f994a9394e5b6f9022eef9a9abede
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